RegulonDB RegulonDB 10.9: Gene Form
   

atoD gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

atoC atoE atoD atoA atoS IHF IHF AtoC AtoC atoDp atoDp

Gene      
Name: atoD    Texpresso search in the literature
Synonym(s): ECK2214, EG11669, b2221
Genome position(nucleotides): 2323447 --> 2324109 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
53.85
External database links:  
ASAP:
ABE-0007347
CGSC:
18514
ECHOBASE:
EB1620
ECOLIHUB:
atoD
OU-MICROARRAY:
b2221
STRING:
511145.b2221
COLOMBOS: atoD


Product      
Name: acetyl-CoA:acetoacetyl-CoA transferase subunit α
Synonym(s): AtoD
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 23.526
Isoelectric point: 4.889
Motif(s):
 
Type Positions Sequence
6 -> 215 MTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIV
24 -> 30 GGFMGIG

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.2 - fatty acids
Gene Ontology Terms (GO)  
molecular_function GO:0016740 - transferase activity
GO:0008410 - CoA-transferase activity
GO:0008775 - acetate CoA-transferase activity
biological_process GO:0006629 - lipid metabolic process
GO:0006631 - fatty acid metabolic process
GO:0019395 - fatty acid oxidation
GO:0046459 - short-chain fatty acid metabolic process
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-9191N
ECOCYC:
ATOD-MONOMER
ECOLIWIKI:
b2221
INTERPRO:
IPR012792
INTERPRO:
IPR037171
INTERPRO:
IPR004165
INTERPRO:
IPR004163
MODBASE:
P76458
PANTHER:
PTHR13707
PDB:
5DBN
PDB:
1K6D
PFAM:
PF01144
PRIDE:
P76458
PRODB:
PRO_000022183
PROSITE:
PS01273
REFSEQ:
NP_416725
SMART:
SM00882
SMR:
P76458
UNIPROT:
P76458


Operon      
Name: atoDAEB         
Operon arrangement:
Transcription unit        Promoter
atoDAEB


Transcriptional Regulation      
Display Regulation             
Activated by: AtoC, IHF


Regulation by small RNA    
  Display Regulation
small RNA spf


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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