RegulonDB RegulonDB 10.8: Gene Form
   

atoD gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

atoC atoE atoD atoA atoS IHF IHF AtoC AtoC atoDp atoDp

Gene      
Name: atoD    Texpresso search in the literature
Synonym(s): ECK2214, EG11669, b2221
Genome position(nucleotides): 2323447 --> 2324109 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
53.85
External database links:  
ASAP:
ABE-0007347
CGSC:
18514
ECHOBASE:
EB1620
OU-MICROARRAY:
b2221
PortEco:
atoD
STRING:
511145.b2221
COLOMBOS: atoD


Product      
Name: acetyl-CoA:acetoacetyl-CoA transferase subunit α
Synonym(s): AtoD
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 23.526
Isoelectric point: 4.889
Motif(s):
 
Type Positions Sequence
6 -> 215 MTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIV
24 -> 30 GGFMGIG

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.2 - fatty acids
Gene Ontology Terms (GO)  
molecular_function GO:0016740 - transferase activity
GO:0008410 - CoA-transferase activity
GO:0008775 - acetate CoA-transferase activity
biological_process GO:0006629 - lipid metabolic process
GO:0006631 - fatty acid metabolic process
GO:0019395 - fatty acid oxidation
GO:0046459 - short-chain fatty acid metabolic process
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-9191N
ECOCYC:
ATOD-MONOMER
ECOLIWIKI:
b2221
INTERPRO:
IPR004165
INTERPRO:
IPR004163
INTERPRO:
IPR037171
INTERPRO:
IPR012792
MINT:
MINT-1293580
MODBASE:
P76458
PANTHER:
PTHR13707
PDB:
1K6D
PDB:
5DBN
PFAM:
PF01144
PRIDE:
P76458
PRODB:
PRO_000022183
PROSITE:
PS01273
REFSEQ:
NP_416725
SMART:
SM00882
SMR:
P76458
UNIPROT:
P76458


Operon      
Name: atoDAEB         
Operon arrangement:
Transcription unit        Promoter
atoDAEB


Transcriptional Regulation      
Display Regulation             
Activated by: AtoC, IHF


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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