RegulonDB RegulonDB 10.10: Gene Form
   

rhaB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rhaB rhaA rhaS rhaD RhaS RhaR RhaS RhaR CRP CRP CRP CRP RhaS RhaS rhaSp rhaSp rhaBp rhaBp rhaDp rhaDp

Gene      
Name: rhaB    Texpresso search in the literature
Synonym(s): ECK3897, EG11868, b3904
Genome position(nucleotides): 4095979 <-- 4097448 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 54.76
External database links:  
ASAP:
 ABE-0012738
CGSC:
 291
ECHOBASE:
 EB1814
ECOLIHUB:
 rhaB
OU-MICROARRAY:
 b3904
STRING:
 511145.b3904
COLOMBOS: rhaB


Product      
Name: rhamnulokinase
Synonym(s): RhaB
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 54.069
Isoelectric point: 4.813
Motif(s):
 
Type Positions Sequence
70 -> 70 E
236 -> 238 HDT
214 -> 214 G
13 -> 17 ASSGR
73 -> 73 R

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.1 - carbon compounds
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0016740 - transferase activity
GO:0008993 - rhamnulokinase activity
GO:0016301 - kinase activity
GO:0016773 - phosphotransferase activity, alcohol group as acceptor
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
biological_process GO:0005975 - carbohydrate metabolic process
GO:0019299 - rhamnose metabolic process
GO:0019301 - rhamnose catabolic process
GO:0016310 - phosphorylation
GO:0046835 - carbohydrate phosphorylation
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 RHAMNULOKIN-MONOMER
ECOLIWIKI:
 b3904
INTERPRO:
 IPR043129
INTERPRO:
 IPR013449
INTERPRO:
 IPR018484
INTERPRO:
 IPR018485
MODBASE:
 P32171
PDB:
 2CGL
PDB:
 2CGK
PDB:
 2CGJ
PFAM:
 PF02782
PFAM:
 PF00370
PRIDE:
 P32171
PRODB:
 PRO_000023734
REFSEQ:
 NP_418340
SMR:
 P32171
UNIPROT:
 P32171


Operon      
Name: rhaBAD         
Operon arrangement:
Transcription unit        Promoter
rhaD
rhaBAD


Transcriptional Regulation      
Display Regulation             
Activated by: CRP, RhaS


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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