RegulonDB RegulonDB 11.1: Gene Form
   

ygaC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

alaE ygaC ygaM anti-terminator anti-anti-terminator ygaMp ygaMp

Gene      
Name: ygaC    Texpresso search in the literature
Synonym(s): ECK2665, EG12201, b2671
Genome position(nucleotides): 2799650 <-- 2799994
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 46.96
External database links:  
ASAP:
 ABE-0008795
ECHOBASE:
 EB2117
ECOLIHUB:
 ygaC
OU-MICROARRAY:
 b2671
STRING:
 511145.b2671
COLOMBOS: ygaC


Product      
Name: DUF2002 domain-containing protein YgaC
Synonym(s): YgaC
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 13.066
Isoelectric point: 8.419
Motif(s):
 
Type Positions Sequence Comment
1 -> 110 MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLF
61 -> 61 T UniProt: In Ref. 1; AAA64939..
94 -> 94 H UniProt: In Ref. 1; AAA64939..
98 -> 114 SRVALERYLNGLFGEAS UniProt: In Ref. 1..

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P0AD53
ECOCYC:
 EG12201-MONOMER
ECOLIWIKI:
 b2671
INTERPRO:
 IPR018994
PFAM:
 PF09400
PRIDE:
 P0AD53
REFSEQ:
 NP_417157
SMR:
 P0AD53
SWISSMODEL:
 P0AD53
UNIPROT:
 P0AD53


Operon      
Name: ygaC         
Operon arrangement:
Transcription unit        Promoter
ygaC


Transcriptional Regulation      
Display Regulation             
Repressed by: Fur


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB