RegulonDB RegulonDB 10.8: Gene Form
   

ygaQ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ygaQ glaH unknown ileY GlaR GlaR CRP ppGpp anti-anti-terminator anti-terminator terminator csiDp csiDp

Gene      
Name: ygaQ    Texpresso search in the literature
Synonym(s): ECK2649, G7389, G7391, G7392, G7393, b2654, b2655, b2656, b2657, b2658, b4462, ygaR, yqaC, yqaD
Type: Pseudo Gene
Genome position(nucleotides): 2786397 --> 2788649 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
37.24
Note(s): ygaQ_1, ygaQ_2, ygaQ_3 and ygaQ_4 may be fragments of a pseudogene Homma K,2002. A full length gene is found in E. coli SMS-3-5, E. coli IAI39 and others and encodes a protein belonging to the alpha amylase family.
External database links:  
ASAP:
ABE-0008751
ASAP:
ABE-0008747
ASAP:
ABE-0008739
ASAP:
ABE-0174112
ASAP:
ABE-0285128
ECHOBASE:
EB3293
ECHOBASE:
EB3294
ECHOBASE:
EB4059
ECHOBASE:
EB4058
ECOLIWIKI:
b2658
ECOLIWIKI:
b2657
ECOLIWIKI:
b2654
ECOLIWIKI:
b4462
ECOO157CYC:
Z3954
OU-MICROARRAY:
b2657
OU-MICROARRAY:
b2656
OU-MICROARRAY:
b2654
OU-MICROARRAY:
b2658
PortEco:
ygaQ_1
PortEco:
ygaQ_2
PortEco:
ygaQ_3
PortEco:
ygaQ_4
STRING:
316407.85675510
UNIPROT:
P76616
COLOMBOS: ygaQ


Product      
Name: putative uncharacterized protein YgaQ
Sequence: Get amino acid sequence Fasta Format
Isoelectric point: 7.19
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
External database links:  
ECOCYC:
G7389-MONOMER
UNIPROT:
P76616


Operon      
Name: ygaQ         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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