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Gene | ![]() ![]() |
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Name: | yqhC ![]() |
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Synonym(s): | ECK3002, G7563, b3010 | |
Genome position(nucleotides): | 3154262 <-- 3155218 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
50.47 | |
External database links: | ||
ASAP: |
ABE-0009884 | |
ECHOBASE: |
EB2833 | |
ECOLIHUB: |
yqhC | |
OU-MICROARRAY: |
b3010 | |
STRING: |
511145.b3010 | |
COLOMBOS: | yqhC |
Product | ![]() ![]() |
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Name: | DNA-binding transcriptional activator YqhC | ||||||||||||||||||
Synonym(s): | YqhC | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Regulator Family: | AraC/XylS | ||||||||||||||||||
Cellular location: | cytosol | ||||||||||||||||||
Molecular weight: | 35.957 | ||||||||||||||||||
Isoelectric point: | 8.346 | ||||||||||||||||||
Motif(s): | |||||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||||
Evidence: | [APPHINH] Assay of protein purified to homogeneity from its native host [HIFS] Human inference of function from sequence [IEP] Inferred from expression pattern |
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Reference(s): |
[1] Lee C., et al., 2010 [2] Perez-Rueda E., et al., 2000 [3] Perez-Rueda E., et al., 2004 |
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External database links: | |||||||||||||||||||
ECOCYC: |
G7563-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b3010 | ||||||||||||||||||
INTERPRO: |
IPR018060 | ||||||||||||||||||
INTERPRO: |
IPR009594 | ||||||||||||||||||
INTERPRO: |
IPR009057 | ||||||||||||||||||
MODBASE: |
Q46855 | ||||||||||||||||||
PFAM: |
PF12833 | ||||||||||||||||||
PFAM: |
PF06719 | ||||||||||||||||||
PRIDE: |
Q46855 | ||||||||||||||||||
PROSITE: |
PS01124 | ||||||||||||||||||
REFSEQ: |
NP_417483 | ||||||||||||||||||
SMART: |
SM00342 | ||||||||||||||||||
SMR: |
Q46855 | ||||||||||||||||||
UNIPROT: |
Q46855 | ||||||||||||||||||
RNA cis-regulatory element | ![]() |
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Attenuation: | Transcriptional |
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_3317 | 3153632 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_3318 | 3155303 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | yqhCp1 | 3155384 | reverse | nd | [ICWHO] | [5] |
Reference(s) |
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