RegulonDB RegulonDB 10.10: Gene Form
   

yjeN gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

mscM yjeM yjeO yjeN TSS_5000 TSS_5000 TSS_4999 TSS_4999

Gene      
Name: yjeN    Texpresso search in the literature
Synonym(s): ECK4153, G7838, b4157
Genome position(nucleotides): 4385393 --> 4385707 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
50.16
External database links:  
ASAP:
ABE-0013617
ECHOBASE:
EB2369
ECOLIHUB:
yjeN
OU-MICROARRAY:
b4157
STRING:
511145.b4157
COLOMBOS: yjeN


Product      
Name: uncharacterized protein YjeN
Synonym(s): YjeN
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 11.819
Isoelectric point: 5.156
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G7838-MONOMER
ECOLIWIKI:
b4157
PRIDE:
P39283
REFSEQ:
NP_418581
UNIPROT:
P39283


Operon      
Name: yjeNO         
Operon arrangement:
Transcription unit        Promoter
yjeNO


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_4999 4386346 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_5000 4386996 reverse nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates



Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.


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