RegulonDB RegulonDB 10.10: Gene Form
   

ilvG gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ilvG ilvE ilvM ilvX Lrp TSS_4394 TSS_4394 TSS_4393 TSS_4393 TSS_4392 TSS_4392 ilvEp3 ilvEp3 TSS_4390 TSS_4390 TSS_4389 TSS_4389 TSS_4388 TSS_4388 TSS_4387 TSS_4387 TSS_4386 TSS_4386 TSS_4385 TSS_4385 TSS_4384 TSS_4384 TSS_4383 TSS_4383 TSS_4382 (cluster) TSS_4382 (cluster) TSS_4381 TSS_4381

Gene      
Name: ilvG    Texpresso search in the literature
Synonym(s): ECK3760, G8221, b3767, b3768, b4488, ilvO
Type: Pseudo Gene
Genome position(nucleotides): 3950560 --> 3952204 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 54.65
External database links:  
ASAP:
 ABE-0012309
ASAP:
 ABE-0012311
ASAP:
 ABE-0174552
CGSC:
 603
ECOLIHUB:
 ilvG_2
ECOLIHUB:
 ilvG_1
OU-MICROARRAY:
 b3767
COLOMBOS: ilvG


Product      
Name: acetolactate synthase II subunit IlvG
Sequence: Get amino acid sequence Fasta Format
Isoelectric point: 9.253
Motif(s):
 
Type Positions Sequence
251 -> 272 HGTKAANFAVQECDLLIAVGAR
294 -> 313 DIDPAEMNKLRQAHVALQGD
1 -> 327 MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPALQQPLNQ

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G8221-MONOMER
ECOLIWIKI:
 b3767
INTERPRO:
 IPR029035
INTERPRO:
 IPR029061
INTERPRO:
 IPR012001
INTERPRO:
 IPR012000
MODBASE:
 P00892
PFAM:
 PF02776
PFAM:
 PF00205
PRODB:
 PRO_000023006
SMR:
 P0DP89
SWISSMODEL:
 P00892
UNIPROT:
 P0DP89


Operon      
Name: ilvLXGMEDA         
Operon arrangement:
Transcription unit        Promoter
ilvL
ilvLXG_1G_2MEDA
ilvL
ilvLXG_1G_2MEDA
ilvEDA
ilvA


Transcriptional Regulation      
Display Regulation             
Activated by: IHF
Repressed by: IHF, Lrp


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_4381 3950511 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4382 (cluster) 3950539 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4383 3950564 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4384 3950727 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4385 3950822 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4386 3950842 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4387 3950850 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4388 3950867 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4389 3950982 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4390 3951887 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4392 3952390 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4393 3953336 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4394 3953347 forward nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates


Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.

RegulonDB