RegulonDB RegulonDB 10.8: Gene Form
   

ydgV gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

tqsA mdtJ ydgV mdtI H-NS H-NS H-NS TSS_1882 TSS_1882 tqsAp tqsAp mdtJp mdtJp TSS_1880 TSS_1880

Gene      
Name: ydgV    Texpresso search in the literature
Synonym(s): ECK4634, G0-17023, b4777
Genome position(nucleotides): 1673608 <-- 1673709 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
46.08


Product      
Name: protein YdgV
Synonym(s): YdgV
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 3.906
Isoelectric point: 10.306
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
MONOMER0-4489
UNIPROT:
P0DSF5


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_1880 1673778 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_1882 1674496 forward nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates



Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.


RegulonDB