RegulonDB RegulonDB 11.1: Gene Form
   

evgL gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

evgS emrK evgA evgL EvgA TSS_2669 TSS_2669 TSS_2668 (cluster) TSS_2668 (cluster) evgAp1 evgAp1 TSS_2666 TSS_2666 evgAp2 evgAp2 TSS_2665 TSS_2665 emrKp emrKp emrYp1 emrYp1

Gene      
Name: evgL    Texpresso search in the literature
Synonym(s): ECK4638, G0-17027, b4781
Genome position(nucleotides): 2483729 --> 2483758
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 33.33


Product      
Name: protein EvgL
Synonym(s): EvgL
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 1.029
Isoelectric point: 8.551
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 MONOMER0-4493
UNIPROT:
 P0DSF9


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter emrYp1 2482334 reverse nd [COMP-AINF] [1]
  promoter TSS_2665 2483630 forward nd [RS-EPT-CBR] [2]
  promoter TSS_2666 2483632 forward nd [RS-EPT-CBR] [2]
  promoter TSS_2668 (cluster) 2483646 forward nd [RS-EPT-CBR] [2]
  promoter TSS_2669 2485186 forward nd [RS-EPT-CBR] [2]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

 [2] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.

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