RegulonDB RegulonDB 11.1: Gene Form
   

rhaB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rhaB rhaA rhaS rhaD RhaS RhaR RhaS RhaR CRP CRP CRP CRP RhaS RhaS rhaSp2 rhaSp2 rhaSp rhaSp rhaBp rhaBp rhaDp rhaDp

Gene      
Name: rhaB    Texpresso search in the literature
Synonym(s): ECK3897, EG11868, b3904
Genome position(nucleotides): 4095979 <-- 4097448
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 54.76
External database links:  
ASAP:
 ABE-0012738
CGSC:
 291
ECHOBASE:
 EB1814
ECOLIHUB:
 rhaB
OU-MICROARRAY:
 b3904
STRING:
 511145.b3904
COLOMBOS: rhaB


Product      
Name: rhamnulokinase
Synonym(s): RhaB
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 54.069
Isoelectric point: 4.813
Motif(s):
 
Type Positions Sequence Comment
7 -> 242 VAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAV
13 -> 17 ASSGR UniProt: ATP.
69 -> 69 E UniProt: Same kinase activity as the wild-type; when associated with A-70 and A-73..
70 -> 70 E UniProt: Same kinase activity as the wild-type; when associated with A-69 and A-73..
73 -> 73 R UniProt: Same kinase activity as the wild-type; when associated with A-69 and A-70..

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.1 - carbon compounds
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0016740 - transferase activity
GO:0008993 - rhamnulokinase activity
GO:0016301 - kinase activity
GO:0016773 - phosphotransferase activity, alcohol group as acceptor
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
biological_process GO:0005975 - carbohydrate metabolic process
GO:0019299 - rhamnose metabolic process
GO:0019301 - rhamnose catabolic process
GO:0016310 - phosphorylation
GO:0046835 - carbohydrate phosphorylation
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P32171
ECOCYC:
 RHAMNULOKIN-MONOMER
ECOLIWIKI:
 b3904
INTERPRO:
 IPR018485
INTERPRO:
 IPR018484
INTERPRO:
 IPR013449
INTERPRO:
 IPR043129
MODBASE:
 P32171
PDB:
 2CGL
PDB:
 2CGJ
PDB:
 2CGK
PFAM:
 PF02782
PFAM:
 PF00370
PRIDE:
 P32171
PRODB:
 PRO_000023734
REFSEQ:
 NP_418340
SMR:
 P32171
UNIPROT:
 P32171


Operon      
Name: rhaBAD         
Operon arrangement:
Transcription unit        Promoter
rhaD
rhaBAD


Transcriptional Regulation      
Display Regulation             
Activated by: CRP, RhaS


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB