RegulonDB

RegulonDB RegulonDB 11.2: Gene Form

tyrV gene in Escherichia coli K-12 genome

Gene local context to scale (view description)

Gene
Name:	tyrV
Synonym(s):	ECK1225, EG30108, b1230, tyrTbeta
Genome position(nucleotides):	1287244 <-- 1287328
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	58.82
External database links:

ASAP:	ABE-0004134
ECHOBASE:	EB4271
ECOLIHUB:	tyrV
OU-MICROARRAY:	b1230
COLOMBOS:	tyrV

Product

Name:

tRNA-Tyr(GUA)

Synonym(s):

tRNA^tyrV

Type:

tRNAs

Cellular location:

cytosol

Classification:

Multifun Terms (GenProtEC)
Multifun Terms (GenProtEC)		2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)
	cellular_component	GO:0005737 - cytoplasm GO:0005829 - cytosol
	molecular_function	GO:0030533 - triplet codon-amino acid adaptor activity

Note(s):

Note(s): ...[more].

Evidence:

[AS-TAS] Traceable author statement

Reference(s):

External database links:

ECOCYC:

ECOLIWIKI:

Operon

Name:

tyrTV-tpr

Operon arrangement:

Transcriptional Regulation
	Display Regulation
Activated by:	Fis

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
	promoter	tprp1	1287188		reverse	nd	[COMP-AINF]	[4]

Evidence
[COMP-AINF] Inferred computationally without human oversight

Reference(s)
[1] Abelson J., Barnett L., Brenner S., Gefter M., Landy A., Russell R., Smith JD., 1969, Mutant tyrosine transfer ribonucleic acids., FEBS Lett 3(1):1-4
[2] Addepalli B., Limbach PA., 2016, Pseudouridine in the Anticodon of Escherichia coli tRNATyr(QΨA) Is Catalyzed by the Dual Specificity Enzyme RluF., J Biol Chem 291(42):22327-22337
[3] Siekevitz P., Zamecnik PC., 1981, Ribosomes and protein synthesis., J Cell Biol 91(3 Pt 2):53s-65s
[4] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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