RegulonDB RegulonDB 10.8: Gene Form
   

fryC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

fryC ypdF fryB

Gene      
Name: fryC    Texpresso search in the literature
Synonym(s): ECK2382, G7249, b2386, ypdG
Genome position(nucleotides): 2506647 <-- 2507894 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
54.33
External database links:  
ASAP:
ABE-0007871
ECHOBASE:
EB3906
OU-MICROARRAY:
b2386
PortEco:
fryC
STRING:
511145.b2386
COLOMBOS: fryC


Product      
Name: putative PTS enzyme IIC component FryC
Synonym(s): EIICFry, Enzyme IICFry, FryC, YpdG
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 43.966
Isoelectric point: 10.467
Motif(s):
 
Type Positions Sequence
41 -> 343 SGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIP
342 -> 362 IPSYMVGAIVGSTAAVWLGAV
379 -> 399 LGVYMAGIALGAVITALMVVF
158 -> 178 SPVPSTFIGALIISIVAGYLV
35 -> 410 LPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKL

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.1 - carbon compounds
  4 - transport --> 4.4 - Group Translocators --> 4.4.A - Phosphotransferase Systems (PEP-dependent PTS)
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0016740 - transferase activity
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GO:0090563 - protein-phosphocysteine-sugar phosphotransferase activity
biological_process GO:0008643 - carbohydrate transport
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system
GO:0034219 - carbohydrate transmembrane transport
Note(s): Note(s): ...[more].
Reference(s): [1] Jindal S., et al., 2019
External database links:  
ECOCYC:
MONOMER0-6
ECOLIWIKI:
b2386
INTERPRO:
IPR013014
INTERPRO:
IPR003352
PFAM:
PF02378
PRIDE:
P77579
PRODB:
PRO_000022708
PROSITE:
PS51104
REFSEQ:
NP_416887
UNIPROT:
P77579


Operon      
Name: fryBC-ypdFE-fryA         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Jindal S., Yang L., Day PJ., Kell DB., 2019, Involvement of multiple influx and efflux transporters in the accumulation of cationic fluorescent dyes by Escherichia coli., BMC Microbiol 19(1):195


RegulonDB