RegulonDB RegulonDB 10.8: Gene Form
   

aroM gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

aroM ppnP yaiA ppnPp ppnPp aroMp aroMp TSS_500 TSS_500

Gene      
Name: aroM    Texpresso search in the literature
Synonym(s): ECK0385, EG10083, b0390
Genome position(nucleotides): 407428 --> 408105 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
46.46
External database links:  
ASAP:
ABE-0001357
CGSC:
18523
ECHOBASE:
EB0081
OU-MICROARRAY:
b0390
PortEco:
aroM
STRING:
511145.b0390
COLOMBOS: aroM


Product      
Name: protein AroM
Synonym(s): AroM
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 24.917
Isoelectric point: 4.558
Motif(s):
 
Type Positions Sequence
152 -> 152 L
5 -> 224 LAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELL
155 -> 155 S

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
EG10083-MONOMER
ECOLIWIKI:
b0390
INTERPRO:
IPR010843
PFAM:
PF07302
PRIDE:
P0AE28
PRODB:
PRO_000022152
PRODOM:
PD037589
REFSEQ:
NP_414924
SMR:
P0AE28
UNIPROT:
P0AE28


Operon      
Name: aroL-yaiA-aroM         
Operon arrangement:
Transcription unit        Promoter
aroL-yaiA-aroM
aroL-yaiA-aroM
aroM
yaiA-aroM


Transcriptional Regulation      
Display Regulation             
Repressed by: TyrR, TrpR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_500 407091 forward nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates



Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.


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