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Gene | ![]() ![]() |
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Name: | atpD ![]() |
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Synonym(s): | ECK3725, EG10101, b3732, papB, uncD | |
Genome position(nucleotides): | 3915993 <-- 3917375 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
54.74 | |
External database links: | ||
ASAP: |
ABE-0012208 | |
CGSC: |
30 | |
ECHOBASE: |
EB0099 | |
ECOLIHUB: |
atpD | |
OU-MICROARRAY: |
b3732 | |
STRING: |
511145.b3732 | |
COLOMBOS: | atpD |
Product | ![]() ![]() |
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Name: | ATP synthase F1 complex subunit β | ||||||||||||||||||
Synonym(s): | ATP synthase F1 complex - beta subunit, AtpD, PapB, UncD | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Cellular location: | inner membrane | ||||||||||||||||||
Molecular weight: | 50.325 | ||||||||||||||||||
Isoelectric point: | 4.635 | ||||||||||||||||||
Motif(s): |
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Classification: | |||||||||||||||||||
External database links: | |||||||||||||||||||
DIP: |
DIP-31846N | ||||||||||||||||||
ECOCYC: |
ATPD-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b3732 | ||||||||||||||||||
INTERPRO: |
IPR027417 | ||||||||||||||||||
INTERPRO: |
IPR036121 | ||||||||||||||||||
INTERPRO: |
IPR024034 | ||||||||||||||||||
INTERPRO: |
IPR020003 | ||||||||||||||||||
INTERPRO: |
IPR005722 | ||||||||||||||||||
INTERPRO: |
IPR004100 | ||||||||||||||||||
INTERPRO: |
IPR003593 | ||||||||||||||||||
INTERPRO: |
IPR000194 | ||||||||||||||||||
MINT: |
P0ABB4 | ||||||||||||||||||
PDB: |
5T4P | ||||||||||||||||||
PDB: |
3OAA | ||||||||||||||||||
PDB: |
5T4O | ||||||||||||||||||
PDB: |
1D8S | ||||||||||||||||||
PDB: |
5T4Q | ||||||||||||||||||
PFAM: |
PF02874 | ||||||||||||||||||
PFAM: |
PF00006 | ||||||||||||||||||
PRIDE: |
P0ABB4 | ||||||||||||||||||
PRODB: |
PRO_000022189 | ||||||||||||||||||
PROSITE: |
PS00152 | ||||||||||||||||||
REFSEQ: |
NP_418188 | ||||||||||||||||||
SMART: |
SM00382 | ||||||||||||||||||
SMR: |
P0ABB4 | ||||||||||||||||||
SWISSMODEL: |
P0ABB4 | ||||||||||||||||||
UNIPROT: |
P0ABB4 | ||||||||||||||||||
Operon | ![]() ![]() |
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Name: | atpIBEFHAGDC | ||||||||
Operon arrangement: |
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Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_4293 | 3915989 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | atpCp1 | 3916059 | reverse | nd | [ICWHO] | [2] | ||
promoter | TSS_4294 | 3916641 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4295 | 3916759 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4296 | 3916978 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4297 | 3917001 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4298 | 3917107 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4299 (cluster) | 3917272 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4300 | 3917275 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4301 (cluster) | 3917397 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4302 | 3917446 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4303 | 3917736 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4304 (cluster) | 3917740 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4305 (cluster) | 3917744 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4306 | 3917765 | reverse | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_4307 | 3918078 | reverse | nd | [RS-EPT-CBR] | [1] |
Reference(s) |
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