RegulonDB RegulonDB 10.8: Gene Form
   

cynX gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

cynX lacA cynS

Gene      
Name: cynX    Texpresso search in the literature
Synonym(s): ECK0338, EG10177, b0341
Genome position(nucleotides): 359992 --> 361146 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
58.7
External database links:  
ASAP:
ABE-0001175
CGSC:
31261
ECHOBASE:
EB0174
OU-MICROARRAY:
b0341
PortEco:
cynX
STRING:
511145.b0341
COLOMBOS: cynX


Product      
Name: cyanate transporter
Synonym(s): CynX, CynX cyanate MFS transporter
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 41.361
Isoelectric point: 10.687
Motif(s):
 
Type Positions Sequence
204 -> 224 YFGLINGGYASLIAWLPAFYI
18 -> 337 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPMQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAP
89 -> 109 ALLLSSALLGGVGIGIIQAVM
235 -> 255 SLLALMTLGQAAGALLMPAMA
34 -> 54 FSVAALLTALPVVTMGGLALA

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.24 - cyanate catabolism
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
  5 - cell processes --> 5.6 - protection --> 5.6.2 - detoxification
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0022857 - transmembrane transporter activity
biological_process GO:0009440 - cyanate catabolic process
GO:0055085 - transmembrane transport
Note(s): Note(s): ...[more].
Reference(s): [1] Sung YC., et al., 1989
External database links:  
ECOCYC:
CYNX-MONOMER
ECOLIWIKI:
b0341
INTERPRO:
IPR020846
INTERPRO:
IPR036259
INTERPRO:
IPR011701
INTERPRO:
IPR004747
MODBASE:
P17583
PFAM:
PF07690
PRIDE:
P17583
PRODB:
PRO_000022367
PROSITE:
PS50850
REFSEQ:
NP_414875
SMR:
P17583
UNIPROT:
P17583


Operon      
Name: cynTSX         
Operon arrangement:
Transcription unit        Promoter
cynTS
cynTSX


Transcriptional Regulation      
Display Regulation             
Activated by: CynR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Sung YC., Fuchs JA., 1989, Identification and characterization of a cyanate permease in Escherichia coli K-12., J Bacteriol 171(9):4674-8


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