RegulonDB

Gene
Name:	fecD
Synonym(s):	ECK4278, EG10289, b4288
Genome position(nucleotides):	4511458 <-- 4512414 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	59.77
External database links:

ASAP:	ABE-0014059
CGSC:	18394
ECHOBASE:	EB0285
ECOLIHUB:	fecD
ECOO157CYC:	Z4384
ECOO157CYC:	CHUU
ECOO157CYC:	Z1965
OU-MICROARRAY:	b4288
STRING:	511145.b4288
COLOMBOS:	fecD

Product

Name:

ferric citrate ABC transporter membrane subunit FecD

Synonym(s):

FecD

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

inner membrane

Molecular weight:

34.131

Isoelectric point:

10.365

Motif(s):

Type	Positions	Sequence
	41 -> 41	H
	270 -> 290	PVSALTGALLLVVADLLARII
	138 -> 158	LALTGVALSACWASLTDYLML
	3 -> 23	IALVIFITLALAGCALLSLHM
	56 -> 76	LLALFVGAALAVAGVLIQGIV

Classification:

Multifun Terms (GenProtEC)
		6 - cell structure --> 6.1 - membrane
		4 - transport --> 4.3 - Primary Active Transporters --> 4.3.A - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters --> 4.3.A.1 - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases --> 4.3.A.1.m - ABC superfamily, membrane component
Gene Ontology Terms (GO)
	cellular_component	GO:0016020 - membrane GO:0005886 - plasma membrane GO:0005887 - integral component of plasma membrane GO:0016021 - integral component of membrane GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
	molecular_function	GO:0005515 - protein binding GO:0015603 - iron chelate transmembrane transporter activity GO:0022857 - transmembrane transporter activity
	biological_process	GO:0006811 - ion transport GO:0055072 - iron ion homeostasis GO:0055085 - transmembrane transport GO:0033214 - siderophore-dependent iron import into cell

Note(s):

Note(s): ...[more].

External database links:

ECOCYC:

ECOLIWIKI:

ECOO157CYC:

ECOO157CYC:

ECOO157CYC:

INTERPRO:

INTERPRO:

MODBASE:

PANTHER:

PFAM:

PRIDE:

PRODB:

REFSEQ:

UNIPROT:

Transcriptional Regulation
	Display Regulation
Activated by:	CRP, PdhR
Repressed by:	Fur, HypT
Undetermined regulation	AscG

Elements in the selected gene context region unrelated to any object in RegulonDB

Type	Name	Post Left	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
promoter	fecEp3	4511530	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: poor homology. Score: 3.985. P-value: 3.013e-5 Read more >	[ICWHO]	[1]
promoter	fecEp5	4511639	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.986. P-value: 6.841e-5 Read more >	[ICWHO]	[1]
promoter	fecEp4	4511644	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 4.315. P-value: 2.781e-5 Read more >	[ICWHO]	[1]