RegulonDB RegulonDB 10.8: Gene Form
   

glnB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

glrR hmp glnB qseG PurR glnBp3 glnBp3 glnBp2 glnBp2 glnBp1 glnBp1

Gene      
Name: glnB    Texpresso search in the literature
Synonym(s): ECK2550, EG10384, b2553
Genome position(nucleotides): 2687070 <-- 2687408 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
51.03
External database links:  
ASAP:
ABE-0008398
CGSC:
32933
ECHOBASE:
EB0379
OU-MICROARRAY:
b2553
PortEco:
glnB
STRING:
511145.b2553
COLOMBOS: glnB


Product      
Name: nitrogen regulatory protein PII-1
Synonym(s): GlnB, PII, [protein PII], regulatory protein P-II, regulation of nitrogen metabolism and fatty acid biosynthesis, unmodified PII
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 12.425
Isoelectric point: 4.952
Motif(s):
 
Type Positions Sequence
2 -> 8 KKIDAII
27 -> 36 GMTVTEVKGF
83 -> 83 T
97 -> 102 ARVIRI
40 -> 40 K

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.5 - biosynthesis of building blocks --> 1.5.1 - amino acids --> 1.5.1.2 - glutamine
  1 - metabolism --> 1.5 - biosynthesis of building blocks --> 1.5.4 - fatty acids and phosphatidic acid
  1 - metabolism --> 1.8 - metabolism of other compounds --> 1.8.3 - nitrogen metabolism
  3 - regulation --> 3.1 - type of regulation --> 3.1.3 - posttranscriptional --> 3.1.3.3 - inhibition / activation of enzymes
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0005515 - protein binding
GO:0030234 - enzyme regulator activity
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
GO:0042802 - identical protein binding
GO:0036094 - small molecule binding
biological_process GO:0050790 - regulation of catalytic activity
GO:0006808 - regulation of nitrogen utilization
GO:0042304 - regulation of fatty acid biosynthetic process
External database links:  
DIP:
DIP-35005N
ECOCYC:
PROTEIN-PII
ECOLIWIKI:
b2553
INTERPRO:
IPR002332
INTERPRO:
IPR017918
INTERPRO:
IPR015867
INTERPRO:
IPR011322
INTERPRO:
IPR002187
MINT:
MINT-1235669
MODBASE:
P0A9Z1
PANTHER:
PTHR30115
PDB:
5L9N
PDB:
1PIL
PDB:
2PII
PFAM:
PF00543
PRIDE:
P0A9Z1
PRINTS:
PR00340
PRODB:
PRO_000022783
PROSITE:
PS51343
PROSITE:
PS00638
PROSITE:
PS00496
REFSEQ:
NP_417048
SMART:
SM00938
SMR:
P0A9Z1
UNIPROT:
P0A9Z1


Operon      
Name: glrR-glnB         
Operon arrangement:
Transcription unit        Promoter
glnB
glnB
glnB
glrR-glnB
yfhA


Transcriptional Regulation      
Display Regulation             
Repressed by: PurR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB