RegulonDB 8.2: Gene Form

Gene
Name:	glpD
Synonym(s):	b3426, glyD
Genome position(nucleotides):	3560036 --> 3561541 Genome Browser
Strand:	forward
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	55.05
Reference(s):	[1] Persson M., et al., 2000
External database links:

ECOCYC:	EG10394
GENBANK:	2367226
GENBANK_RefSeq:	16131300
OU-MICROARRAY:	b3426
M3D:	glpD
PortEco:	b3426

Shine dalgarno
Sequence:	aacgaaagtgAATGAGggcagcATG

Product

Name:

GlpD

Synonym(s):

GlyD

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

inner membrane (sensu Gram-negative Bacteria),cytosol

Molecular weight:

56.751

Isoelectric point:

7.49

Motif(s):

Type	Positions	Sequence
	464 -> 501	DDALWRRTKQGMWLNADQQSRVSQWLVEYTQQRLSLAS
	328 -> 353	QAITRDYTLDIHDENGKAPLLSVFGG
	23 -> 23	A
	5 -> 33	DLIVIGGGINGAGIAADAAGRGLSVLMLE

Classification:

metabolism --> energy metabolism, carbon --> aerobic respiration

External database links:

ECOCYC:

EXPASY:

GENPROTEC:

GO:

PDB:

PDB:

PDB:

PDB:

PDB:

Operon

Name:

glpD

Operon arrangement:

Transcription unit	Promoter
glpD	glpDp

Transcriptional Regulation
	Display Regulation
	Note: The TF binding sites with unknown position are not displayed in the graphic.
Activated by:	CRP
Repressed by:	ArcA, GlpR

Reference(s)
[1] Persson M., Glatz E., Rutberg B., 2000, Different processing of an mRNA species in Bacillus subtilis and Escherichia coli., J Bacteriol. 182(3):689-95