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Gene | ![]() ![]() |
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Name: | rpsA ![]() |
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Synonym(s): | ECK0902, EG10900, b0911, ssyF | |
Genome position(nucleotides): | 961995 --> 963668 Genome Browser | |
Strand: | forward | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
51.19 | |
External database links: | ||
ASAP: |
ABE-0003104 | |
CGSC: |
230 | |
ECHOBASE: |
EB0893 | |
OU-MICROARRAY: |
b0911 | |
PortEco: |
rpsA | |
STRING: |
511145.b0911 | |
COLOMBOS: | rpsA |
Product | ![]() ![]() |
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Name: | 30S ribosomal subunit protein S1 | ||||||||||||||||||
Synonym(s): | RpsA, SsyF | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Cellular location: | ribosome,cytosol | ||||||||||||||||||
Molecular weight: | 61.158 | ||||||||||||||||||
Isoelectric point: | 4.609 | ||||||||||||||||||
Motif(s): |
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||||
Reference(s): |
[1] Duval M., et al., 2013 [2] Osterberg R., et al., 1978 [3] Pan JY., et al., 2011 |
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External database links: | |||||||||||||||||||
DIP: |
DIP-35884N | ||||||||||||||||||
ECOCYC: |
EG10900-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b0911 | ||||||||||||||||||
INTERPRO: |
IPR000110 | ||||||||||||||||||
INTERPRO: |
IPR003029 | ||||||||||||||||||
INTERPRO: |
IPR012340 | ||||||||||||||||||
INTERPRO: |
IPR022967 | ||||||||||||||||||
MINT: |
P0AG67 | ||||||||||||||||||
MODBASE: |
P0AG67 | ||||||||||||||||||
PDB: |
6H58 | ||||||||||||||||||
PDB: |
6H4N | ||||||||||||||||||
PDB: |
6BU8 | ||||||||||||||||||
PDB: |
4R71 | ||||||||||||||||||
PDB: |
4Q7J | ||||||||||||||||||
PDB: |
2KHJ | ||||||||||||||||||
PDB: |
2KHI | ||||||||||||||||||
PDB: |
2BH8 | ||||||||||||||||||
PDB: |
5XQ5 | ||||||||||||||||||
PFAM: |
PF00575 | ||||||||||||||||||
PRIDE: |
P0AG67 | ||||||||||||||||||
PRINTS: |
PR00681 | ||||||||||||||||||
PRODB: |
PRO_000023854 | ||||||||||||||||||
PROSITE: |
PS50126 | ||||||||||||||||||
REFSEQ: |
NP_415431 | ||||||||||||||||||
SMART: |
SM00316 | ||||||||||||||||||
SMR: |
P0AG67 | ||||||||||||||||||
UNIPROT: |
P0AG67 | ||||||||||||||||||
Operon | ![]() ![]() |
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Name: | cmk-rpsA-ihfB | ||||||||||
Operon arrangement: |
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Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_1178 | 961718 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_1179 (cluster) | 961893 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [4] | ||
promoter | TSS_1180 | 961899 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_1181 | 962373 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_1182 (cluster) | 962813 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [4] | ||
promoter | TSS_1183 | 962831 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_1184 | 962837 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_1185 (cluster) | 963236 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [4] | ||
promoter | TSS_1186 (cluster) | 963240 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [4] | ||
promoter | TSS_1187 (cluster) | 963362 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [4] | ||
promoter | TSS_1188 | 964101 | forward | nd | [RS-EPT-CBR] | [4] | ||
promoter | ycaIp6 | 964105 | forward |
Similarity to the consensus Read more > |
[ICWHO] | [5] | ||
promoter | ycaIp8 | 964108 | forward |
Similarity to the consensus Read more > |
[ICWHO] | [5] |
Reference(s) |
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