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Gene | ![]() ![]() |
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Name: | secD ![]() |
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Synonym(s): | ECK0402, EG10938, b0408 | |
Genome position(nucleotides): | 427647 --> 429494 Genome Browser | |
Strand: | forward | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
53.19 | |
External database links: | ||
ASAP: |
ABE-0001417 | |
CGSC: |
17893 | |
ECHOBASE: |
EB0931 | |
OU-MICROARRAY: |
b0408 | |
PortEco: |
secD | |
STRING: |
511145.b0408 | |
COLOMBOS: | secD |
Product | ![]() ![]() |
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Name: | Sec translocon accessory complex subunit SecD | ||||||||||||||||||
Synonym(s): | SecD | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Cellular location: | inner membrane | ||||||||||||||||||
Molecular weight: | 66.632 | ||||||||||||||||||
Isoelectric point: | 8.99 | ||||||||||||||||||
Motif(s): |
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||||
External database links: | |||||||||||||||||||
DIP: |
DIP-35837N | ||||||||||||||||||
ECOCYC: |
SECD | ||||||||||||||||||
ECOLIWIKI: |
b0408 | ||||||||||||||||||
INTERPRO: |
IPR027398 | ||||||||||||||||||
INTERPRO: |
IPR022813 | ||||||||||||||||||
INTERPRO: |
IPR022646 | ||||||||||||||||||
INTERPRO: |
IPR022645 | ||||||||||||||||||
INTERPRO: |
IPR005791 | ||||||||||||||||||
MINT: |
P0AG90 | ||||||||||||||||||
MODBASE: |
P0AG90 | ||||||||||||||||||
PANTHER: |
PTHR30081 | ||||||||||||||||||
PDB: |
5MG3 | ||||||||||||||||||
PFAM: |
PF13721 | ||||||||||||||||||
PFAM: |
PF07549 | ||||||||||||||||||
PFAM: |
PF02355 | ||||||||||||||||||
PRIDE: |
P0AG90 | ||||||||||||||||||
PRODB: |
PRO_000023925 | ||||||||||||||||||
REFSEQ: |
NP_414942 | ||||||||||||||||||
SMR: |
P0AG90 | ||||||||||||||||||
UNIPROT: |
P0AG90 | ||||||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_512 | 427649 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_513 | 428779 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_514 (cluster) | 428782 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [1] | ||
promoter | TSS_515 | 428786 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_516 | 429239 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_517 | 429370 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_518 | 429682 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_519 | 430048 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_520 (cluster) | 430051 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [1] | ||
promoter | TSS_521 | 430054 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_522 | 430059 | forward | nd | [RS-EPT-CBR] | [1] | ||
promoter | TSS_523 (cluster) | 430063 | forward |
For this promoter, there Read more > |
[RS-EPT-CBR] | [1] | ||
promoter | yajDp6 | 430469 | forward |
Similarity to the consensus Read more > |
[ICWHO] | [2] |
Reference(s) |
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