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Gene | ![]() ![]() |
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Name: | trmD ![]() |
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Synonym(s): | ECK2604, EG11023, b2607 | |
Genome position(nucleotides): | 2744572 <-- 2745339 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
53.39 | |
External database links: | ||
ASAP: |
ABE-0008576 | |
CGSC: |
76 | |
ECHOBASE: |
EB1016 | |
OU-MICROARRAY: |
b2607 | |
PortEco: |
trmD | |
STRING: |
511145.b2607 | |
COLOMBOS: | trmD |
Product | ![]() ![]() |
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Name: | tRNA m1G37 methyltransferase | ||||||||||||||||||
Synonym(s): | TrmD | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Cellular location: | cytosol | ||||||||||||||||||
Molecular weight: | 28.422 | ||||||||||||||||||
Isoelectric point: | 5.588 | ||||||||||||||||||
Motif(s): |
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||||
Reference(s): |
[1] Ashtawy HM., et al., 2018 [2] Christian T., et al., 2004 [3] Hou YM. 2016 [4] Masuda I., et al., 2019 |
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External database links: | |||||||||||||||||||
DIP: |
DIP-48264N | ||||||||||||||||||
ECOCYC: |
EG11023-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b2607 | ||||||||||||||||||
INTERPRO: |
IPR029028 | ||||||||||||||||||
INTERPRO: |
IPR016009 | ||||||||||||||||||
INTERPRO: |
IPR023148 | ||||||||||||||||||
INTERPRO: |
IPR002649 | ||||||||||||||||||
INTERPRO: |
IPR029026 | ||||||||||||||||||
MODBASE: |
P0A873 | ||||||||||||||||||
PANTHER: |
PTHR46417 | ||||||||||||||||||
PDB: |
1P9P | ||||||||||||||||||
PFAM: |
PF01746 | ||||||||||||||||||
PRIDE: |
P0A873 | ||||||||||||||||||
REFSEQ: |
NP_417098 | ||||||||||||||||||
SMR: |
P0A873 | ||||||||||||||||||
UNIPROT: |
P0A873 | ||||||||||||||||||
Operon | ![]() ![]() |
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Name: | rpsP-rimM-trmD-rplS | ||||
Operon arrangement: |
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Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_2947 | 2744532 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | rplSp1 | 2744642 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [6] | ||
promoter | TSS_2948 | 2744644 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2949 | 2744647 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2950 | 2744657 | reverse | nd | [RS-EPT-CBR] | [5] | ||
promoter | TSS_2951 | 2744665 | reverse | nd | [RS-EPT-CBR] | [5] |
Reference(s) |
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