RegulonDB RegulonDB 10.8: Gene Form
   

rem gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ydfU rem hokD anti-anti-terminator anti-terminator terminator remp2 remp2 remp1 remp1

Gene      
Name: rem    Texpresso search in the literature
Synonym(s): ECK1555, EG11129, b1561
Genome position(nucleotides): 1644651 <-- 1644902 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
40.48
External database links:  
ASAP:
ABE-0005215
ECHOBASE:
EB1119
OU-MICROARRAY:
b1561
PortEco:
rem
STRING:
511145.b1561
COLOMBOS: rem


Product      
Name: Qin prophage; protein Rem
Synonym(s): Rem
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 9.235
Isoelectric point: 5.054
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
EG11129-MONOMER
ECOLIWIKI:
b1561
INTERPRO:
IPR016418
PRIDE:
P07010
REFSEQ:
NP_416079
UNIPROT:
P07010


Operon      
Name: rem         
Operon arrangement:
Transcription unit        Promoter
 


RNA cis-regulatory element    
Attenuation: Transcriptional


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter remp1 1644972 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter remp2 1644975 reverse Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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