RegulonDB RegulonDB 10.7: Gene Form
   

tdcD gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

tdcE tdcC tdcD

Gene      
Name: tdcD    Texpresso search in the literature
Synonym(s): ECK3104, EG11172, b3115, yhaA
Genome position(nucleotides): 3262452 <-- 3263660 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
48.3
External database links:  
ASAP:
ABE-0010245
ECHOBASE:
EB1159
OU-MICROARRAY:
b3115
PORTECO:
tdcD
REGULONDB:
b3115
STRING:
511145.b3115
M3D: tdcD
COLOMBOS: tdcD
PortEco: b3115


Product      
Name: propionate kinase
Synonym(s): TdcD, YhaA
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 43.384
Isoelectric point: 5.792
Motif(s):
 
Type Positions Sequence
278 -> 280 DLR
396 -> 402 NAPAEFA
121 -> 121 A
244 -> 244 A
141 -> 141 V

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.30 - threonine catabolism
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0005515 - protein binding
GO:0016740 - transferase activity
GO:0046872 - metal ion binding
GO:0016301 - kinase activity
GO:0016774 - phosphotransferase activity, carboxyl group as acceptor
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
GO:0008776 - acetate kinase activity
GO:0008980 - propionate kinase activity
biological_process GO:0006082 - organic acid metabolic process
GO:0016310 - phosphorylation
GO:0006567 - threonine catabolic process
GO:0019665 - anaerobic amino acid catabolic process
GO:0070689 - L-threonine catabolic process to propionate
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-10971N
ECOCYC:
PROPKIN-MONOMER
ECOLIWIKI:
b3115
INTERPRO:
IPR000890
INTERPRO:
IPR024917
INTERPRO:
IPR023865
INTERPRO:
IPR004372
MINT:
MINT-1273849
MODBASE:
P11868
PANTHER:
PTHR21060:SF17
PANTHER:
PTHR21060
PFAM:
PF00871
PRIDE:
P11868
PRINTS:
PR00471
PRODB:
PRO_000024040
PROSITE:
PS01076
PROSITE:
PS01075
PROTEINMODELPORTAL:
P11868
REFSEQ:
NP_417585
SMR:
P11868
SWISSMODEL:
P11868
UNIPROT:
P11868


Operon      
Name: tdcABCDEFG         
Operon arrangement:
Transcription unit        Promoter
tdcABCDEFG
tdcBCDEFG


Transcriptional Regulation      
Display Regulation             
Activated by: TdcA, CRP, TdcR, FNR, IHF


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB