RegulonDB RegulonDB 10.8: Gene Form
   

potH gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

potG potH potI ybjO terminator anti-terminator anti-anti-terminator ybjOp5 ybjOp5 ybjOp4 ybjOp4

Gene      
Name: potH    Texpresso search in the literature
Synonym(s): ECK0847, EG11631, b0856
Genome position(nucleotides): 896134 --> 897087 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
50.94
External database links:  
ASAP:
ABE-0002917
CGSC:
31700
ECHOBASE:
EB1588
OU-MICROARRAY:
b0856
PortEco:
potH
STRING:
511145.b0856
COLOMBOS: potH


Product      
Name: putrescine ABC transporter membrane subunit PotH
Synonym(s): PotH
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 35.489
Isoelectric point: 8.2
Motif(s):
 
Type Positions Sequence
134 -> 153 ILLLLVILPSWTSFLIRVYA
240 -> 259 GIIAGSMLVFIPAVGEFVIP
285 -> 304 PVASAVAIIMLLLLIVPIMW
185 -> 204 LAVYIGIVYAYVPFMVLPIY
32 -> 51 VIALPYIWLILLFLLPFLIV

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.4 - amines
  6 - cell structure --> 6.1 - membrane
  4 - transport --> 4.3 - Primary Active Transporters --> 4.3.A - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters --> 4.3.A.1 - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases --> 4.3.A.1.m - ABC superfamily, membrane component
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
GO:0043190 - ATP-binding cassette (ABC) transporter complex
biological_process GO:0055085 - transmembrane transport
GO:0015847 - putrescine transport
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
POTH-MONOMER
ECOLIWIKI:
b0856
INTERPRO:
IPR035906
INTERPRO:
IPR000515
PFAM:
PF00528
PRIDE:
P31135
PRODB:
PRO_000023573
PROSITE:
PS50928
REFSEQ:
NP_415377
SMR:
P31135
UNIPROT:
P31135


Operon      
Name: potFGHI         
Operon arrangement:
Transcription unit        Promoter
potFGHI
potFGHI


Transcriptional Regulation      
Display Regulation             
Activated by: NtrC


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ybjOp4 897852 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter ybjOp5 897947 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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