RegulonDB RegulonDB 10.10: Gene Form
   

yihP gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yihQ yihO yihP yihOp3 yihOp3 ompLp1 ompLp1

Gene      
Name: yihP    Texpresso search in the literature
Synonym(s): ECK3870, EG11842, b3877
Genome position(nucleotides): 4065809 <-- 4067194 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
52.38
External database links:  
ASAP:
ABE-0012664
ECHOBASE:
EB1788
ECOLIHUB:
yihP
OU-MICROARRAY:
b3877
STRING:
511145.b3877
COLOMBOS: yihP


Product      
Name: putative 2,3-dihydroxypropane-1-sulfonate export protein
Synonym(s): YihP
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 50.982
Isoelectric point: 9.268
Motif(s):
 
Type Positions Sequence
48 -> 68 LGLPGTYGGIIFLISKFFTAF
93 -> 113 ILYASFPVTLLAIANFVGTPF
163 -> 183 GGATLGLLLCTVGFVPVMNLI
309 -> 329 VYIGGLLIWVLGDLLNYFFGG
331 -> 351 SVSFVAFSCLAFFGSAFVNSL

 

Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0015293 - symporter activity
GO:0022857 - transmembrane transporter activity
biological_process GO:0008643 - carbohydrate transport
GO:0006814 - sodium ion transport
GO:0055085 - transmembrane transport
GO:0071702 - organic substance transport
Note(s): Note(s): ...[more].
Reference(s): [1] Denger K., et al., 2014
[2] Jindal S., et al., 2019
External database links:  
ECOCYC:
YIHP-MONOMER
ECOLIWIKI:
b3877
INTERPRO:
IPR036259
INTERPRO:
IPR039672
INTERPRO:
IPR018043
INTERPRO:
IPR001927
MODBASE:
P32137
PANTHER:
PTHR11328
PFAM:
PF13347
PRIDE:
P32137
PROSITE:
PS00872
REFSEQ:
NP_418313
UNIPROT:
P32137


Operon      
Name: yihPO         
Operon arrangement:
Transcription unit        Promoter
yihPO


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ompLp1 4064479 reverse nd [ICWHO] [3]
  promoter yihOp3 4065971 reverse nd [ICWHO] [3]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Denger K., Weiss M., Felux AK., Schneider A., Mayer C., Spiteller D., Huhn T., Cook AM., Schleheck D., 2014, Sulphoglycolysis in Escherichia coli K-12 closes a gap in the biogeochemical sulphur cycle., Nature 507(7490):114-7

 [2] Jindal S., Yang L., Day PJ., Kell DB., 2019, Involvement of multiple influx and efflux transporters in the accumulation of cationic fluorescent dyes by Escherichia coli., BMC Microbiol 19(1):195

 [3] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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