RegulonDB RegulonDB 10.6.3: Gene Form
   

zraP gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

zraS yjaH zraP zraR ZraR ZraR CRP terminator anti-terminator anti-anti-terminator zraSp zraSp zraPp zraPp

Gene      
Name: zraP    Texpresso search in the literature
Synonym(s): ECK3994, EG11918, b4002, yjaI, zra
Genome position(nucleotides): 4201263 <-- 4201688 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
53.52
External database links:  
ASAP:
ABE-0013081
ECHOBASE:
EB1862
ECOCYC:
EG11918
ECOLIHUB:
zraP
OU-MICROARRAY:
b4002
REGULONDB:
b4002
STRING:
511145.b4002
M3D: zraP
COLOMBOS: zraP
PortEco: b4002


Product      
Name: signaling pathway modulator ZraP
Synonym(s): YjaI, Zra, ZraP
Sequence: Get amino acid sequence Fasta Format
Cellular location: periplasmic space
Molecular weight: 15.199
Isoelectric point: 9.531
Motif(s):
 
Type Positions Sequence
9 -> 120 LVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRG
1 -> 26 MKRNTKIALVMMALSAMAMGSTSAFA
27 -> 141 HGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW

 

Classification:
Multifun Terms (GenProtEC)  
  5 - cell processes --> 5.5 - adaptations --> 5.5.1 - osmotic pressure
  5 - cell processes --> 5.5 - adaptations --> 5.5.4 - pH
  5 - cell processes --> 5.6 - protection
Gene Ontology Terms (GO)  
cellular_component GO:0030288 - outer membrane-bounded periplasmic space
GO:0042597 - periplasmic space
molecular_function GO:0005507 - copper ion binding
GO:0016151 - nickel cation binding
GO:0008270 - zinc ion binding
GO:0042802 - identical protein binding
GO:0050897 - cobalt ion binding
biological_process GO:0036460 - cellular response to cell envelope stress
External database links:  
ECOCYC:
EG11918-MONOMER
ECOLIWIKI:
b4002
INTERPRO:
IPR020365
INTERPRO:
IPR025961
PFAM:
PF13801
PRIDE:
P0AAA9
PRODB:
PRO_000024255
PRODOM:
PD097062
PROTEINMODELPORTAL:
P0AAA9
REFSEQ:
NP_418430
SMR:
P0AAA9
UNIPROT:
P0AAA9


Operon      
Name: zraP         
Operon arrangement:
Transcription unit        Promoter
zraP


Transcriptional Regulation      
Display Regulation             
Activated by: ZraR
Growth Conditions:

[1] 

C: Escherichia coli| LB medium| ZnCl2 1 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6
E: Escherichia coli| hydH knockout mutant| LB medium| ZnCl2 1 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6

[2] 

C: Escherichia coli| LB medium| glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6
E: Escherichia coli| LB medium| ZnCl2 0.2 to 1 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6

[3] 

C: Escherichia coli| LB medium| ZnCl2 1 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6
E: Escherichia coli| hydG knockout mutant| LB medium| ZnCl2 1 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6

[4] 

C: Escherichia coli| LB medium| glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6
E: Escherichia coli| LB medium| cadmium dichloride 0.5 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6

[5] 

C: Escherichia coli| LB medium| glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6
E: Escherichia coli| LB medium| PbCl2 1 mM; glucose 0.4%| oxygen atom| OD600 from 0.4 to 0.6



Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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