RegulonDB RegulonDB 10.8: Gene Form
   

yehY gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yehY yehX osmF yehW yohO

Gene      
Name: yehY    Texpresso search in the literature
Synonym(s): ECK2123, EG12011, b2130
Genome position(nucleotides): 2217400 <-- 2218557 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
57.43
External database links:  
ASAP:
ABE-0007038
ECHOBASE:
EB1949
OU-MICROARRAY:
b2130
PortEco:
yehY
STRING:
511145.b2130
COLOMBOS: yehY


Product      
Name: glycine betaine ABC transporter membrane subunit YehY
Synonym(s): YehY
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 41.139
Isoelectric point: 9.94
Motif(s):
 
Type Positions Sequence
225 -> 245 VALFGLLIAPLAALVTAFPWL
323 -> 343 TVGMAVIAALIGAGGFGALVF
45 -> 65 WPQTIWMLVGVGCAWLTACFI
346 -> 385 LLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND
195 -> 375 GVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLL

 

Classification:
Multifun Terms (GenProtEC)  
  6 - cell structure --> 6.1 - membrane
  4 - transport --> 4.3 - Primary Active Transporters --> 4.3.A - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters --> 4.3.A.1 - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases --> 4.3.A.1.m - ABC superfamily, membrane component
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
molecular_function GO:0005515 - protein binding
biological_process GO:0006865 - amino acid transport
GO:0055085 - transmembrane transport
GO:0031460 - glycine betaine transport
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-11913N
ECOCYC:
YEHY-MONOMER
ECOLIWIKI:
b2130
INTERPRO:
IPR035906
INTERPRO:
IPR000515
MINT:
MINT-1271646
PFAM:
PF00528
PRIDE:
P33361
PROSITE:
PS50928
REFSEQ:
NP_416634
SMR:
P33361
UNIPROT:
P33361


Operon      
Name: osmF-yehYXW         
Operon arrangement:
Transcription unit        Promoter
osmF-yehYXW
osmF-yehYXW


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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