RegulonDB RegulonDB 10.8: Gene Form
   

rihB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

nupX rihB yeiL FNR Lrp IHF IHF yeiLp yeiLp rihBp rihBp

Gene      
Name: rihB    Texpresso search in the literature
Synonym(s): ECK2155, EG12030, b2162, yeiK
Genome position(nucleotides): 2254245 <-- 2255186 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 52.02
External database links:  
ASAP:
 ABE-0007156
ECHOBASE:
 EB1965
OU-MICROARRAY:
 b2162
PortEco:
 rihB
STRING:
 511145.b2162
COLOMBOS: rihB


Product      
Name: pyrimidine-specific ribonucleoside hydrolase RihB
Synonym(s): RihB, YeiK, ribonucleoside hydrolase 2 (pyrimidine-specific)
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 33.748
Isoelectric point: 4.495
Motif(s):
 
Type Positions Sequence
82 -> 82 H
4 -> 299 RKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFW
239 -> 239 H

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.33 - nucleotide and nucleoside conversions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
GO:0032991 - protein-containing complex
molecular_function GO:0016787 - hydrolase activity
GO:0046872 - metal ion binding
GO:0016798 - hydrolase activity, acting on glycosyl bonds
GO:0008477 - purine nucleosidase activity
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0045437 - uridine nucleosidase activity
GO:0005509 - calcium ion binding
GO:0042802 - identical protein binding
GO:0050263 - ribosylpyrimidine nucleosidase activity
biological_process GO:0008152 - metabolic process
GO:0006206 - pyrimidine nucleobase metabolic process
GO:0006152 - purine nucleoside catabolic process
GO:0046133 - pyrimidine ribonucleoside catabolic process
GO:0051289 - protein homotetramerization
External database links:  
ECOCYC:
 EG12030-MONOMER
ECOLIWIKI:
 b2162
ECOO157CYC:
 YEIK-MONOMER
INTERPRO:
 IPR022977
INTERPRO:
 IPR036452
INTERPRO:
 IPR023186
INTERPRO:
 IPR001910
INTERPRO:
 IPR015910
MODBASE:
 P33022
PANTHER:
 PTHR12304
PDB:
 3B9X
PDB:
 1Q8F
PFAM:
 PF01156
PRIDE:
 P33022
PRODB:
 PRO_000023757
PROSITE:
 PS01247
REFSEQ:
 NP_416667
SMR:
 P33022
UNIPROT:
 P33022


Operon      
Name: rihB         
Operon arrangement:
Transcription unit        Promoter
rihB


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB