RegulonDB RegulonDB 10.8: Gene Form
   

ccmC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ccmC ccmB ccmE ccmD ccmF ccmA

Gene      
Name: ccmC    Texpresso search in the literature
Synonym(s): ECK2191, EG12057, b2199, yejT, yejU
Genome position(nucleotides): 2295583 <-- 2296320 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
55.28
External database links:  
ASAP:
ABE-0007275
CGSC:
36581
ECHOBASE:
EB1987
OU-MICROARRAY:
b2199
PortEco:
ccmC
STRING:
511145.b2199
COLOMBOS: ccmC


Product      
Name: heme trafficking system membrane protein CcmC
Synonym(s): CcmC, YejT, YejU
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 27.885
Isoelectric point: 10.935
Motif(s):
 
Type Positions Sequence
21 -> 41 FIPWLAIASVVVLTVGWIWGF
129 -> 149 LTSELVLLFLYVGVIALWHAF
17 -> 36 ICGWFIPWLAIASVVVLTVG
64 -> 84 AIWSMGIYASMAVAAFIGLVW
158 -> 175 AAGILVLIGVVNLPIIHY

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.6 - biosynthesis of macromolecules (cellular constituents) --> 1.6.15 - large molecule carriers --> 1.6.15.1 - cytochromes
  2 - information transfer --> 2.3 - protein related --> 2.3.4 - chaperoning, repair (refolding)
  6 - cell structure --> 6.1 - membrane
  4 - transport --> 4.3 - Primary Active Transporters --> 4.3.A - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters --> 4.3.A.1 - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases --> 4.3.A.1.m - ABC superfamily, membrane component
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0005515 - protein binding
GO:0015232 - heme transporter activity
GO:0020037 - heme binding
biological_process GO:0017004 - cytochrome complex assembly
GO:0015886 - heme transport
GO:0017003 - protein-heme linkage
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
CCMC-MONOMER
ECOLIWIKI:
b2199
INTERPRO:
IPR003557
INTERPRO:
IPR002541
MINT:
P0ABM1
PANTHER:
PTHR30071:SF4
PFAM:
PF01578
PRIDE:
P0ABM1
PRINTS:
PR01386
PRODB:
PRO_000022259
REFSEQ:
NP_416703
UNIPROT:
P0ABM1


Operon      
Name: napFDAGHBC-ccmABCDEFGH         
Operon arrangement:
Transcription unit        Promoter
napFDAGHBC-ccmABCDEFGH
napFDAGHBC-ccmABCDEFGH
napFDAGHBC
ccmABCDEFGH


Transcriptional Regulation      
Display Regulation             
Activated by: FNR, ModE, FlhDC, NarP
Repressed by: NarL, NarP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB