RegulonDB RegulonDB 10.7: Gene Form
   

yadL gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yadL yadK yadM

Gene      
Name: yadL    Texpresso search in the literature
Synonym(s): ECK0136, EG12326, b0137
Genome position(nucleotides): 151626 <-- 152231 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
42.57
External database links:  
ASAP:
ABE-0000475
ECHOBASE:
EB2230
OU-MICROARRAY:
b0137
PORTECO:
yadL
REGULONDB:
b0137
STRING:
511145.b0137
M3D: yadL
COLOMBOS: yadL
PortEco: b0137


Product      
Name: putative fimbrial protein YadL
Synonym(s): YadL
Sequence: Get amino acid sequence Fasta Format
Cellular location: extracellular space,pilus
Molecular weight: 21.047
Isoelectric point: 8.595
Motif(s):
 
Type Positions Sequence
29 -> 201 ATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN
51 -> 201 VNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN
1 -> 28 MMTFKNLRYGLSSSVVLAASLFSVLSYA

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0009289 - pilus
GO:0005576 - extracellular region
biological_process GO:0007155 - cell adhesion
Note(s): Note(s): ...[more].
Reference(s): [1] Korea CG., et al., 2011
[2] Wurpel DJ., et al., 2013
External database links:  
ECOCYC:
EG12326-MONOMER
ECOLIWIKI:
b0137
INTERPRO:
IPR000259
INTERPRO:
IPR008966
INTERPRO:
IPR036937
PFAM:
PF00419
PRIDE:
P37017
PROTEINMODELPORTAL:
P37017
REFSEQ:
NP_414679
SMR:
P37017
UNIPROT:
P37017


Operon      
Name: yadMLKC         
Operon arrangement:
Transcription unit        Promoter
yadC
yadMLKC


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Korea CG., Ghigo JM., Beloin C., 2011, The sweet connection: Solving the riddle of multiple sugar-binding fimbrial adhesins in Escherichia coli: Multiple E. coli fimbriae form a versatile arsenal of sugar-binding lectins potentially involved in surface-colonisation and tissue tropism., Bioessays 33(4):300-11

 [2] Wurpel DJ., Beatson SA., Totsika M., Petty NK., Schembri MA., 2013, Chaperone-usher fimbriae of Escherichia coli., PLoS One 8(1):e52835


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