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Gene | ![]() ![]() |
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Name: | ybcJ ![]() |
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Synonym(s): | ECK0521, EG12879, b0528 | |
Genome position(nucleotides): | 556661 <-- 556873 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
54.93 | |
External database links: | ||
ASAP: |
ABE-0001816 | |
ECHOBASE: |
EB2717 | |
OU-MICROARRAY: |
b0528 | |
PortEco: |
ybcJ | |
STRING: |
511145.b0528 | |
COLOMBOS: | ybcJ |
Product | ![]() ![]() |
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Name: | putative RNA-binding protein YbcJ | ||||||||||||||
Synonym(s): | YbcJ | ||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||
Cellular location: | cytosol | ||||||||||||||
Molecular weight: | 7.39 | ||||||||||||||
Isoelectric point: | 8.258 | ||||||||||||||
Motif(s): | |||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||
Evidence: | [HIFS] Human inference of function from sequence [IGI] Inferred from genetic interaction [IMP] Inferred from mutant phenotype |
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Reference(s): |
[1] Gagarinova A., et al., 2016 [2] Hu P., et al., 2009 [3] Volpon L., et al., 2003 |
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External database links: | |||||||||||||||
DIP: |
DIP-47878N | ||||||||||||||
ECOCYC: |
EG12879-MONOMER | ||||||||||||||
ECOLIWIKI: |
b0528 | ||||||||||||||
INTERPRO: |
IPR036986 | ||||||||||||||
INTERPRO: |
IPR002942 | ||||||||||||||
MINT: |
MINT-1218447 | ||||||||||||||
MODBASE: |
P0AAS7 | ||||||||||||||
PDB: |
1P9K | ||||||||||||||
PFAM: |
PF13275 | ||||||||||||||
PRIDE: |
P0AAS7 | ||||||||||||||
PROSITE: |
PS50889 | ||||||||||||||
REFSEQ: |
NP_415061 | ||||||||||||||
SMR: |
P0AAS7 | ||||||||||||||
UNIPROT: |
P0AAS7 | ||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | ybcIp5 | 556632 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [4] | ||
promoter | ybcJp4 | 556891 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [4] | ||
promoter | ybcJp3 | 556967 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [4] | ||
promoter | ybcJp5 | 557006 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [4] | ||
promoter | ybcJp7 | 557025 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [4] | ||
promoter | TSS_679 | 557596 | reverse | nd | [RS-EPT-CBR] | [5] |
Reference(s) |
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