RegulonDB RegulonDB 10.8: Gene Form
   

lysV gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

xapR lysV valY Cis-reg

Gene      
Name: lysV    Texpresso search in the literature
Synonym(s): ECK2398, EG30056, b2404, supN
Genome position(nucleotides): 2521253 --> 2521328 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 50.0
External database links:  
ASAP:
 ABE-0007920
CGSC:
 132
ECHOBASE:
 EB4219
OU-MICROARRAY:
 b2404
PortEco:
 lysV
COLOMBOS: lysV


Product      
Name: tRNA-Lys(UUU)
Synonym(s): tRNAlysV
Type: tRNAs
Cellular location: cytosol
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0030533 - triplet codon-amino acid adaptor activity
Note(s): Note(s): ...[more].
Evidence: [TAS] Traceable author statement
Reference(s): [1] Murphy FV., et al., 2004
[2] Siekevitz P., et al., 1981
External database links:  
ECOCYC:
 lysV-tRNA
ECOLIWIKI:
 b2404


Operon      
Name: valUXY-lysV         
Operon arrangement:
Transcription unit        Promoter
valUXY-lysV


Transcriptional Regulation      
Display Regulation             
Activated by: Fis


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Murphy FV., Ramakrishnan V., Malkiewicz A., Agris PF., 2004, The role of modifications in codon discrimination by tRNA(Lys)UUU., Nat Struct Mol Biol 11(12):1186-91

 [2] Siekevitz P., Zamecnik PC., 1981, Ribosomes and protein synthesis., J Cell Biol 91(3 Pt 2):53s-65s

RegulonDB