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Gene | ![]() ![]() |
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Name: | tpke70 ![]() |
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Synonym(s): | G0-8906 | |
Type: | Phantom Gene | |
Genome position(nucleotides): | 2496194 <-- 2496629 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
49.77 | |
Note(s): | Tpke70 is a candiate small RNA locus of approximately 435 nt; Northern blot experiments identified an RNA of 40 nt Rivas E,2001. Likely functional regions of Tpke70 were identified within the entire 435 nt region; of the predicted mRNA targets, testing by electrophoretic mobility shift assay confirmed an interaction with the mcrA, torT, glnK, and agaS mRNAs Mihailovic MK,2018. Review: 12654996 |
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External database links: | ||
PortEco: |
tpke70 | |
COLOMBOS: | tpke70 |
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | yfdYp5 | 2495333 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [1] | ||
promoter | yfdYp6 | 2495336 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [1] | ||
promoter | TSS_2670 | 2495493 | forward | nd | [RS-EPT-CBR] | [2] |
Reference(s) |
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