Gene
Name:	gloB
Synonym(s):	ECK0212, G6099, b0212, yafR
Genome position(nucleotides):	234027 <-- 234782 Genome Browser
Strand:	reverse
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	40.21
External database links:

ASAP:	ABE-0000707
ECHOBASE:	EB3114
OU-MICROARRAY:	b0212
PortEco:	gloB
STRING:	511145.b0212
COLOMBOS:	gloB

Type	Name	Post Left	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
promoter	TSS_429	233980	reverse	nd	[RS-EPT-CBR]	[2]
promoter	mltDp4	233982	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 5.546. P-value: 2.081e-5 Read more >	[ICWHO]	[3]
promoter	mltDp3	234025	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: good homology. Score: 3.24. P-value: 7.636e-5 Read more >	[ICWHO]	[3]
promoter	yafSp2	234784	forward	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.19. P-value: 3.754e-5 Read more >	[ICWHO]	[3]
promoter	TSS_430	234785	forward	nd	[RS-EPT-CBR]	[2]
promoter	gloBp5	234926	reverse	Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.533. P-value: 2.277e-5 Read more >	[ICWHO]	[3]

Evidence
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates
[ICWHO] Inferred computationally without human oversight

Reference(s)
[1] McCarthy AJ., Negus D., Martin P., Pechincha C., Oswald E., Stabler RA., Taylor PW., 2016, Pathoadaptive Mutations of Escherichia coli K1 in Experimental Neonatal Systemic Infection., PLoS One 11(11):e0166793
[2] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.
[3] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78