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Gene | ![]() ![]() |
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Name: | intF ![]() |
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Synonym(s): | ECK0280, G6152, b0281, yagO | |
Genome position(nucleotides): | 295696 <-- 297096 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
44.33 | |
External database links: | ||
ASAP: |
ABE-0000979 | |
ECHOBASE: |
EB3324 | |
ECOO157CYC: |
Z1835 | |
OU-MICROARRAY: |
b0281 | |
PortEco: |
intF | |
STRING: |
511145.b0281 | |
COLOMBOS: | intF |
Product | ![]() ![]() |
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Name: | CP4-6 prophage; putative phage integrase | |||||||||||||||
Synonym(s): | IntF, YagO | |||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | |||||||||||||||
Molecular weight: | 53.074 | |||||||||||||||
Isoelectric point: | 10.511 | |||||||||||||||
Motif(s): | ||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | |||||||||||||||
Reference(s): | [1] Sargentini NJ., et al., 2016 | |||||||||||||||
External database links: | ||||||||||||||||
ECOCYC: |
G6152-MONOMER | |||||||||||||||
ECOLIWIKI: |
b0281 | |||||||||||||||
ECOO157CYC: |
Z1835-MONOMER | |||||||||||||||
INTERPRO: |
IPR013762 | |||||||||||||||
INTERPRO: |
IPR038488 | |||||||||||||||
INTERPRO: |
IPR025166 | |||||||||||||||
INTERPRO: |
IPR011010 | |||||||||||||||
INTERPRO: |
IPR010998 | |||||||||||||||
INTERPRO: |
IPR002104 | |||||||||||||||
MODBASE: |
P71298 | |||||||||||||||
PFAM: |
PF13356 | |||||||||||||||
PFAM: |
PF00589 | |||||||||||||||
PRIDE: |
P71298 | |||||||||||||||
PROSITE: |
PS51898 | |||||||||||||||
PROSITE: |
PS51900 | |||||||||||||||
REFSEQ: |
NP_414815 | |||||||||||||||
SMR: |
P71298 | |||||||||||||||
UNIPROT: |
P71298 | |||||||||||||||
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_474 (cluster) | 295620 | reverse |
For this promoter, there Read more > |
[RS-EPT-CBR] | [2] | ||
promoter | yagNp8 | 295656 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | yagNp3 | 295660 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | yagNp5 | 295663 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | yagNp4 | 295671 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] |
Reference(s) |
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