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Gene | ![]() ![]() |
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Name: | ecpR ![]() |
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Synonym(s): | ECK0293, G6165, b0294, matA, ykgK | |
Genome position(nucleotides): | 310746 <-- 311336 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
39.09 | |
External database links: | ||
ASAP: |
ABE-0001011 | |
ECHOBASE: |
EB4070 | |
OU-MICROARRAY: |
b0294 | |
PortEco: |
matA | |
STRING: |
511145.b0294 | |
COLOMBOS: | ecpR |
Product | ![]() ![]() |
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Name: | DNA-binding transcriptional dual regulator MatA | |||||||||||||||
Synonym(s): | EcpR, MatA, YkgK | |||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | |||||||||||||||
Regulator Family: | LuxR/UhpA | |||||||||||||||
Cellular location: | cytosol | |||||||||||||||
Molecular weight: | 23.274 | |||||||||||||||
Isoelectric point: | 9.78 | |||||||||||||||
Motif(s): | ||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | |||||||||||||||
Evidence: | [AIFS] Automated inference of function from sequence [APPHINH] Assay of protein purified to homogeneity from its native host [IEP] Inferred from expression pattern |
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Reference(s): |
[1] Lehti TA., et al., 2012 [2] Perez-Rueda E., et al., 2004 |
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External database links: | ||||||||||||||||
ECOCYC: |
G6165-MONOMER | |||||||||||||||
ECOLIWIKI: |
b0294 | |||||||||||||||
INTERPRO: |
IPR016032 | |||||||||||||||
INTERPRO: |
IPR000792 | |||||||||||||||
INTERPRO: |
IPR036388 | |||||||||||||||
MODBASE: |
P71301 | |||||||||||||||
PFAM: |
PF00196 | |||||||||||||||
PRIDE: |
P71301 | |||||||||||||||
PRINTS: |
PR00038 | |||||||||||||||
PROSITE: |
PS50043 | |||||||||||||||
REFSEQ: |
NP_414828 | |||||||||||||||
SMART: |
SM00421 | |||||||||||||||
SMR: |
P71301 | |||||||||||||||
UNIPROT: |
P71301 | |||||||||||||||
RNA cis-regulatory element | ![]() |
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Attenuation: | Translational |
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | matAp9 | 311432 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | matAp5 | 311446 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | matAp10 | 311460 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | matAp7 | 311482 | reverse |
Similarity to the consensus Read more > |
[ICWHO] | [3] | ||
promoter | ykgLp1 | 311939 | forward |
Similarity to the consensus Read more > |
[ICWHO] | [3] |
Reference(s) |
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