RegulonDB RegulonDB 10.7: Gene Form
   

ykgL gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ecpR ykgL ykgO terminator ykgLp1 ykgLp1 matAp7 matAp7 matAp10 matAp10 matAp5 matAp5 matAp9 matAp9 matAp1 matAp1 matBp5 matBp5

Gene      
Name: ykgL    Texpresso search in the literature
Synonym(s): ECK0294, G6166, b0295
Genome position(nucleotides): 312112 --> 312339 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
43.86
External database links:  
ASAP:
ABE-0001019
ECHOBASE:
EB4071
OU-MICROARRAY:
b0295
PORTECO:
ykgL
REGULONDB:
b0295
STRING:
511145.b0295
M3D: ykgL
COLOMBOS: ykgL
PortEco: b0295


Product      
Name: uncharacterized protein YkgL
Synonym(s): YkgL
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 8.767
Isoelectric point: 8.946
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6166-MONOMER
ECOLIWIKI:
b0295
PRIDE:
P56257
PROTEINMODELPORTAL:
P56257
REFSEQ:
NP_414829
UNIPROT:
P56257


Operon      
Name: ykgL         
Operon arrangement:
Transcription unit        Promoter
ykgL


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter matAp9 311432 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter matAp5 311446 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter matAp10 311460 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter matAp7 311482 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter ykgLp1 311939 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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