RegulonDB RegulonDB 10.8: Gene Form
   

allB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ybbW allB ybbY ybbYp ybbYp allBp allBp allBp2 allBp2 allBp3 allBp3

Gene      
Name: allB    Texpresso search in the literature
Synonym(s): ECK0505, G6281, b0512, glxB3, ybbX
Genome position(nucleotides): 539147 --> 540508 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
51.62
External database links:  
ASAP:
ABE-0001768
ECHOBASE:
EB3384
OU-MICROARRAY:
b0512
PortEco:
allB
STRING:
511145.b0512
COLOMBOS: allB


Product      
Name: allantoinase
Synonym(s): AllB, YbbX
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 49.602
Isoelectric point: 5.054
Motif(s):
 
Type Positions Sequence
50 -> 431 VVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDV

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.26 - allantoin assimilation
  1 - metabolism --> 1.8 - metabolism of other compounds --> 1.8.3 - nitrogen metabolism
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0016787 - hydrolase activity
GO:0046872 - metal ion binding
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0008270 - zinc ion binding
GO:0004038 - allantoinase activity
GO:0050897 - cobalt ion binding
biological_process GO:0000256 - allantoin catabolic process
GO:0009442 - allantoin assimilation pathway
GO:0006144 - purine nucleobase metabolic process
GO:0006145 - purine nucleobase catabolic process
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6281-MONOMER
ECOLIWIKI:
b0512
INTERPRO:
IPR006680
INTERPRO:
IPR032466
INTERPRO:
IPR017593
INTERPRO:
IPR011059
MODBASE:
P77671
PDB:
3E74
PFAM:
PF01979
PRIDE:
P77671
PRODB:
PRO_000022080
REFSEQ:
NP_415045
SMR:
P77671
UNIPROT:
P77671


Operon      
Name: gcl-hyi-glxR-ybbW-allB-ybbY-glxK         
Operon arrangement:
Transcription unit        Promoter
gcl-hyi-glxR-ybbVW-allB-ybbY-glxK
allB
allB
allB
ybbY-glxK
glxK


Transcriptional Regulation      
Display Regulation             
Repressed by: AllR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB