RegulonDB RegulonDB 10.8: Gene Form
   

citF gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

citF citE citX citG citD

Gene      
Name: citF    Texpresso search in the literature
Synonym(s): ECK0608, G6341, b0615, ybdV
Genome position(nucleotides): 648039 <-- 649571 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
56.36
External database links:  
ASAP:
ABE-0002119
ECHOBASE:
EB3311
OU-MICROARRAY:
b0615
PortEco:
citF
STRING:
511145.b0615
COLOMBOS: citF


Product      
Name: citrate lyase α subunit
Synonym(s): CitF, YbdV, citrate lyase citrate-acyl carrier protein transferase subunit, citrate lyase, citrate-ACP transferase alpha; subunit, citrate lyase, citrate-acyl carrier protein transferase alpha; subunit
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 55.173
Isoelectric point: 6.402
Motif(s):
 
Type Positions Sequence
43 -> 508 DRKLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSDCHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNIDVAFLGVPSCDEFGNANGYTGKACCGSLGYAIVDADNAKQVVMLTEELLPYPHNPASIEQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQTGTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAAQSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRGASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPARPELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.1 - unassigned reversible reactions
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0009346 - citrate lyase complex
molecular_function GO:0016740 - transferase activity
GO:0016829 - lyase activity
GO:0008814 - citrate CoA-transferase activity
GO:0008815 - citrate (pro-3S)-lyase activity
biological_process GO:0006084 - acetyl-CoA metabolic process
External database links:  
ECOCYC:
CITTRANS-MONOMER
ECOLIWIKI:
b0615
INTERPRO:
IPR037171
INTERPRO:
IPR006472
MODBASE:
P75726
PANTHER:
PTHR40596
PFAM:
PF04223
PRIDE:
P75726
REFSEQ:
NP_415148
SMR:
P75726
SWISSMODEL:
P75726
UNIPROT:
P75726


Operon      
Name: citCDEFXG         
Operon arrangement:
Transcription unit        Promoter
citCDEFXG
citCDEFXG


Transcriptional Regulation      
Display Regulation             
Activated by: DpiA
Repressed by: CRP, FNR, ArcA, NarL


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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