RegulonDB RegulonDB 10.8: Gene Form
   

yceJ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: yceJ    Texpresso search in the literature
Synonym(s): ECK1042, G6554, b1057
Genome position(nucleotides): 1118480 <-- 1119046 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
51.15
External database links:  
ASAP:
ABE-0003585
ECHOBASE:
EB2526
OU-MICROARRAY:
b1057
PortEco:
yceJ
STRING:
511145.b1057
COLOMBOS: yceJ


Product      
Name: putative cytochrome b561 YceJ
Synonym(s): YceJ
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 20.736
Isoelectric point: 9.209
Motif(s):
 
Type Positions Sequence
92 -> 112 AGHLALYLLLFAIGISGYLIS
9 -> 180 RYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLG
144 -> 164 LHFWLAWSVVVLSVMHGFMAL
16 -> 36 AFHWLSAIIVYGMFALGLWMV

 

Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.6 - biosynthesis of macromolecules (cellular constituents) --> 1.6.15 - large molecule carriers --> 1.6.15.1 - cytochromes
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0009055 - electron transfer activity
GO:0046872 - metal ion binding
GO:0020037 - heme binding
biological_process GO:0022904 - respiratory electron transport chain
GO:0055114 - oxidation-reduction process
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6554-MONOMER
ECOLIWIKI:
b1057
INTERPRO:
IPR016174
INTERPRO:
IPR011577
PFAM:
PF01292
PRIDE:
P75925
REFSEQ:
NP_415575
SMR:
P75925
UNIPROT:
P75925


Operon      
Name: yceJI         
Operon arrangement:
Transcription unit        Promoter
yceJI
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yceIp5 1118641 reverse Similarity to the consensus
Read more >
[ICWHO] [1]



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