RegulonDB RegulonDB 10.7: Gene Form
   

ycgY gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

treA ycgY ymgE ycgYp6 ycgYp6 ycgYp1 ycgYp1

Gene      
Name: ycgY    Texpresso search in the literature
Synonym(s): ECK1184, G6625, b1196
Genome position(nucleotides): 1245160 --> 1245600 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
41.5
External database links:  
ASAP:
ABE-0004019
ECHOBASE:
EB4023
OU-MICROARRAY:
b1196
PORTECO:
ycgY
REGULONDB:
b1196
STRING:
511145.b1196
M3D: ycgY
COLOMBOS: ycgY
PortEco: b1196


Product      
Name: uncharacterized protein YcgY
Synonym(s): YcgY
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 16.695
Isoelectric point: 5.245
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G6625-MONOMER
ECOLIWIKI:
b1196
PRIDE:
P76012
PROTEINMODELPORTAL:
P76012
REFSEQ:
NP_415714
UNIPROT:
P76012


Operon      
Name: ycgY         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ycgYp1 1245083 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter ycgYp6 1245101 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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