RegulonDB RegulonDB 10.9: Gene Form
   

paaA gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

paaZ paaA paaB PaaX SlyA CRP SlyA IHF SlyA PaaX anti-anti-terminator anti-terminator paaAp paaAp paaZp paaZp

Gene      
Name: paaA    Texpresso search in the literature
Synonym(s): ECK1385, G6709, b1388, ydbO
Genome position(nucleotides): 1453927 --> 1454856 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 52.15
External database links:  
ASAP:
 ABE-0004649
ECHOBASE:
 EB3499
ECOLIHUB:
 paaA
OU-MICROARRAY:
 b1388
STRING:
 511145.b1388
COLOMBOS: paaA


Product      
Name: phenylacetyl-CoA 1,2-epoxidase, monooxygenase subunit
Synonym(s): PaaA, YdbO
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 35.499
Isoelectric point: 6.517
Motif(s):
 
Type Positions Sequence
202 -> 204 SPN
210 -> 210 T
17 -> 291 IEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQERLDAKRKAWEEGTW
103 -> 106 KYSS

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.1 - carbon compounds
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0005515 - protein binding
GO:0016491 - oxidoreductase activity
GO:0097266 - phenylacetyl-CoA 1,2-epoxidase activity
biological_process GO:0010124 - phenylacetate catabolic process
GO:0055114 - oxidation-reduction process
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G6709-MONOMER
ECOLIWIKI:
 b1388
INTERPRO:
 IPR011881
INTERPRO:
 IPR009078
INTERPRO:
 IPR007814
INTERPRO:
 IPR012347
MODBASE:
 P76077
PDB:
 4II4
PDB:
 3PW8
PDB:
 3PW1
PDB:
 3PVY
PDB:
 3PVT
PDB:
 3PVR
PDB:
 3PWQ
PFAM:
 PF05138
PRIDE:
 P76077
PRODB:
 PRO_000023475
REFSEQ:
 NP_415906
SMR:
 P76077
UNIPROT:
 P76077


Operon      
Name: paaABCDEFGHIJK         
Operon arrangement:
Transcription unit        Promoter
paaABCDEFGHIJK
paaJ
paaJ
paaJ


Transcriptional Regulation      
Display Regulation             
Activated by: SlyA, CRP, IHF
Repressed by: PaaX


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB