RegulonDB RegulonDB 10.8: Gene Form
   

rrrQ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rrrQ rzpQ ydfR rzoQ essQ terminator

Gene      
Name: rrrQ    Texpresso search in the literature
Synonym(s): ECK1548, G6827, b1554, ydfQ
Genome position(nucleotides): 1639524 <-- 1640057 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 50.56
External database links:  
ASAP:
 ABE-0005189
ECHOBASE:
 EB3590
OU-MICROARRAY:
 b1554
PortEco:
 ydfQ
STRING:
 511145.b1554
COLOMBOS: rrrQ


Product      
Name: Qin prophage; putative lysozyme
Synonym(s): RrrQ, YdfQ
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 19.663
Isoelectric point: 8.931
Motif(s):
 
Type Positions Sequence
48 -> 166 IWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQ

 
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
molecular_function GO:0003824 - catalytic activity
GO:0016787 - hydrolase activity
GO:0016798 - hydrolase activity, acting on glycosyl bonds
GO:0003796 - lysozyme activity
biological_process GO:0008152 - metabolic process
GO:0009253 - peptidoglycan catabolic process
GO:0019076 - viral release from host cell
GO:0016998 - cell wall macromolecule catabolic process
GO:0019835 - cytolysis
GO:0042742 - defense response to bacterium
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G6827-MONOMER
ECOLIWIKI:
 b1554
INTERPRO:
 IPR002196
INTERPRO:
 IPR023346
MODBASE:
 P76159
PFAM:
 PF00959
PRIDE:
 P76159
REFSEQ:
 NP_416072
SMR:
 P76159
UNIPROT:
 P76159


Operon      
Name: essQ-ydfR-rrrQ-rzpQ         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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