RegulonDB RegulonDB 11.1: Gene Form
   

selO gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

selO rflP ydiE IscR terminator ydiUp ydiUp

Gene      
Name: selO    Texpresso search in the literature
Synonym(s): ECK1704, G6924, b1706, ydiU
Genome position(nucleotides): 1789808 <-- 1791244
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 52.82
External database links:  
ASAP:
 ABE-0005694
ECHOBASE:
 EB3737
ECOLIHUB:
 ydiU
OU-MICROARRAY:
 b1706
STRING:
 511145.b1706
COLOMBOS: selO


Product      
Name: protein adenylyltransferase SelO
Synonym(s): SelO, UPF0061 family protein YdiU, YdiU
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 54.382
Isoelectric point: 5.703
Motif(s):
 
Type Positions Sequence Comment
2 -> 450 TLSFVTRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLADDEDKYRLWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGERMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEAL
84 -> 87 GDGR UniProt: ATP.
107 -> 107 K UniProt: Loss of catalytic activity..
119 -> 120 DG UniProt: ATP.
130 -> 130 E UniProt: Loss of catalytic activity..

 
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.3 - protein related --> 2.3.3 - posttranslational modification
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0070733 - protein adenylyltransferase activity
GO:0016779 - nucleotidyltransferase activity
GO:0016740 - transferase activity
GO:0046872 - metal ion binding
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
GO:0000287 - magnesium ion binding
biological_process GO:0018117 - protein adenylylation
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P77649
DIP:
 DIP-11762N
ECOCYC:
 G6924-MONOMER
ECOLIWIKI:
 b1706
INTERPRO:
 IPR003846
PANTHER:
 PTHR32057
PDB:
 6K20
PDB:
 6III
PFAM:
 PF02696
PRIDE:
 P77649
REFSEQ:
 NP_416221
SMR:
 P77649
UNIPROT:
 P77649


Operon      
Name: selO         
Operon arrangement:
Transcription unit        Promoter
ydiU


Transcriptional Regulation      
Display Regulation             
Activated by: IscR


RNA cis-regulatory element    
Attenuation: Translational


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB