RegulonDB RegulonDB 10.8: Gene Form
   

ydiU gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ydiU ydiV ydiE IscR terminator ydiUp ydiUp

Gene      
Name: ydiU    Texpresso search in the literature
Synonym(s): ECK1704, G6924, b1706
Genome position(nucleotides): 1789808 <-- 1791244 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
52.82
External database links:  
ASAP:
ABE-0005694
ECHOBASE:
EB3737
OU-MICROARRAY:
b1706
PortEco:
ydiU
STRING:
511145.b1706
COLOMBOS: ydiU


Product      
Name: UPF0061 family protein YdiU
Synonym(s): YdiU
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 54.382
Isoelectric point: 5.703
Motif(s):
 
Type Positions Sequence
2 -> 450 TLSFVTRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLADDEDKYRLWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGERMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEAL
170 -> 170 R
246 -> 246 D
256 -> 256 D
177 -> 177 R

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0070733 - protein adenylyltransferase activity
GO:0016779 - nucleotidyltransferase activity
GO:0016740 - transferase activity
GO:0046872 - metal ion binding
GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
GO:0000287 - magnesium ion binding
biological_process GO:0018117 - protein adenylylation
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-11762N
ECOCYC:
G6924-MONOMER
ECOLIWIKI:
b1706
INTERPRO:
IPR003846
PANTHER:
PTHR32057
PFAM:
PF02696
PRIDE:
P77649
REFSEQ:
NP_416221
SMR:
P77649
UNIPROT:
P77649


Operon      
Name: ydiU         
Operon arrangement:
Transcription unit        Promoter
ydiU


Transcriptional Regulation      
Display Regulation             
Activated by: IscR


RNA cis-regulatory element    
Attenuation: Translational


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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