RegulonDB RegulonDB 10.8: Gene Form
   

yeaV gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yeaV yeaW dmlA terminator anti-terminator anti-anti-terminator

Gene      
Name: yeaV    Texpresso search in the literature
Synonym(s): ECK1799, G6987, b1801
Genome position(nucleotides): 1883188 --> 1884633 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
51.24
External database links:  
ASAP:
ABE-0005995
ECHOBASE:
EB3281
OU-MICROARRAY:
b1801
PortEco:
yeaV
STRING:
511145.b1801
COLOMBOS: yeaV


Product      
Name: putative transporter YeaV
Synonym(s): YeaV
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 52.881
Isoelectric point: 8.536
Motif(s):
 
Type Positions Sequence
392 -> 412 LFWCVVITLIPLSILFTGASL
173 -> 193 VQAFVILLSGGIFCLSSWIGI
289 -> 309 VIWGLILGSTVGCWFFFGVME
348 -> 368 LFLAAYLGVMIIFLASHMDAV
32 -> 52 LSWLFMFICAGLGSSTLYWGV

 

Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0022857 - transmembrane transporter activity
biological_process GO:0055085 - transmembrane transport
GO:0071705 - nitrogen compound transport
Note(s): Note(s): ...[more].
Reference(s): [1] Jindal S., et al., 2019
[2] Riley M., et al., 2006
External database links:  
ECOCYC:
YEAV-MONOMER
ECOLIWIKI:
b1801
INTERPRO:
IPR000060
INTERPRO:
IPR018093
PANTHER:
PTHR30047
PFAM:
PF02028
PRIDE:
P0ABD1
PROSITE:
PS01303
REFSEQ:
NP_416315
SMR:
P0ABD1
UNIPROT:
P0ABD1


Operon      
Name: yeaVW         
Operon arrangement:
Transcription unit        Promoter
 


RNA cis-regulatory element    
Attenuation: Transcriptional


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Jindal S., Yang L., Day PJ., Kell DB., 2019, Involvement of multiple influx and efflux transporters in the accumulation of cationic fluorescent dyes by Escherichia coli., BMC Microbiol 19(1):195

 [2] Riley M., Abe T., Arnaud MB., Berlyn MK., Blattner FR., Chaudhuri RR., Glasner JD., Horiuchi T., Keseler IM., Kosuge T., Mori H., Perna NT., Plunkett G., Rudd KE., Serres MH., Thomas GH., Thomson NR., Wishart D., Wanner BL., 2006, Escherichia coli K-12: a cooperatively developed annotation snapshot--2005., Nucleic Acids Res 34(1):1-9


RegulonDB