RegulonDB RegulonDB 10.7: Gene Form
   

yfdQ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yfdQ yfdR yfdP yfdS terminator

Gene      
Name: yfdQ    Texpresso search in the literature
Synonym(s): ECK2354, G7229, b2360
Genome position(nucleotides): 2474032 --> 2474856 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
45.7
External database links:  
ASAP:
ABE-0007788
ECHOBASE:
EB3891
OU-MICROARRAY:
b2360
PORTECO:
yfdQ
REGULONDB:
b2360
STRING:
511145.b2360
M3D: yfdQ
COLOMBOS: yfdQ
PortEco: b2360


Product      
Name: CPS-53 (KpLE1) prophage; protein YfdQ
Synonym(s): YfdQ
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 30.442
Isoelectric point: 4.711
Motif(s):
 
Type Positions Sequence
7 -> 272 ATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTF

 

Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-12005N
ECOCYC:
G7229-MONOMER
ECOLIWIKI:
b2360
INTERPRO:
IPR019276
PFAM:
PF10065
PRIDE:
P76513
PROTEINMODELPORTAL:
P76513
REFSEQ:
NP_416861
UNIPROT:
P76513


Operon      
Name: yfdPQ         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB