RegulonDB RegulonDB 10.8: Gene Form
   

yfdR gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yfdQ yfdR yfdS yfdT ypdJ anti-terminator terminator

Gene      
Name: yfdR    Texpresso search in the literature
Synonym(s): ECK2355, G7230, b2361
Genome position(nucleotides): 2474984 --> 2475520 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 46.18
External database links:  
ASAP:
 ABE-0007791
ECHOBASE:
 EB3892
OU-MICROARRAY:
 b2361
PortEco:
 yfdR
STRING:
 511145.b2361
COLOMBOS: yfdR


Product      
Name: CPS-53 (KpLE1) prophage; 5'-deoxynucleotidase
Synonym(s): YfdR
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 20.255
Isoelectric point: 5.575
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0002953 - 5'-deoxynucleotidase activity
GO:0005515 - protein binding
GO:0050897 - cobalt ion binding
biological_process GO:0016311 - dephosphorylation
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G7230-MONOMER
ECOLIWIKI:
 b2361
INTERPRO:
 IPR006674
PRIDE:
 P76514
REFSEQ:
 NP_416862
SMART:
 SM00471
SMR:
 P76514
UNIPROT:
 P76514


Operon      
Name: yfdRST         
Operon arrangement:
Transcription unit        Promoter
 


RNA cis-regulatory element    
Attenuation: Translational


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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