RegulonDB RegulonDB 10.8: Gene Form
   

yffM gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yffL yffN yffM yffOp7 yffOp7 yffOp8 yffOp8

Gene      
Name: yffM    Texpresso search in the literature
Synonym(s): ECK2439, G7274, b2444
Genome position(nucleotides): 2561368 --> 2561613 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
48.78
External database links:  
ASAP:
ABE-0008061
ECHOBASE:
EB3926
OU-MICROARRAY:
b2444
PortEco:
yffM
STRING:
511145.b2444
COLOMBOS: yffM


Product      
Name: CPZ-55 prophage; uncharacterized protein YffM
Synonym(s): YffM
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 9.206
Isoelectric point: 7.205
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G7274-MONOMER
ECOLIWIKI:
b2444
PRIDE:
P76544
REFSEQ:
NP_416939
UNIPROT:
P76544


Operon      
Name: yffMN         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yffOp8 2561902 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yffOp7 2561993 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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