RegulonDB RegulonDB 10.8: Gene Form
   

ypfH gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

tmcA ypfH ypfN

Gene      
Name: ypfH    Texpresso search in the literature
Synonym(s): ECK2469, G7296, b2473
Genome position(nucleotides): 2593072 <-- 2593770 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
53.93
External database links:  
ASAP:
ABE-0008145
ECHOBASE:
EB3947
OU-MICROARRAY:
b2473
PortEco:
ypfH
STRING:
511145.b2473
COLOMBOS: ypfH


Product      
Name: esterase YpfH
Synonym(s): YpfH
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 24.855
Isoelectric point: 4.571
Motif(s):
 
Type Positions Sequence
4 -> 209 DHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTI

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0016788 - hydrolase activity, acting on ester bonds
GO:0016787 - hydrolase activity
GO:0052689 - carboxylic ester hydrolase activity
Note(s): Note(s): ...[more].
Evidence: [APPH] Assay of protein purified to homogeneity
Reference(s): [1] Kuznetsova E., et al., 2005
External database links:  
ECOCYC:
G7296-MONOMER
ECOLIWIKI:
b2473
INTERPRO:
IPR003140
INTERPRO:
IPR029058
MODBASE:
P76561
PFAM:
PF02230
PRIDE:
P76561
REFSEQ:
NP_416968
SMR:
P76561
UNIPROT:
P76561


Operon      
Name: ypfH         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Kuznetsova E., Proudfoot M., Sanders SA., Reinking J., Savchenko A., Arrowsmith CH., Edwards AM., Yakunin AF., 2005, Enzyme genomics: Application of general enzymatic screens to discover new enzymes., FEMS Microbiol Rev 29(2):263-79


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