RegulonDB RegulonDB 10.8: Gene Form
   

yqeJ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yqeI yqeH yqeJ yqeL yqeIp5 yqeIp5 yqeIp6 yqeIp6 yqeIp7 yqeIp7 yqeIp8 yqeIp8 yqeIp1 yqeIp1

Gene      
Name: yqeJ    Texpresso search in the literature
Synonym(s): ECK2846, G7468, b2848
Genome position(nucleotides): 2989304 --> 2989786 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
31.68
External database links:  
ASAP:
ABE-0009354
ECHOBASE:
EB2904
OU-MICROARRAY:
b2848
PortEco:
yqeJ
STRING:
511145.b2848
COLOMBOS: yqeJ


Product      
Name: protein YqeJ
Synonym(s): YqeJ
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 18.719
Isoelectric point: 9.253
Motif(s):
 
Type Positions Sequence
8 -> 28 LLFILVFISGFILFTVYSYTA

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G7468-MONOMER
ECOLIWIKI:
b2848
PRIDE:
Q46943
REFSEQ:
NP_417325
SMR:
Q46943
UNIPROT:
Q46943


Operon      
Name: yqeIJ         
Operon arrangement:
Transcription unit        Promoter
 


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yqeIp1 2988344 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yqeIp8 2988415 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yqeIp7 2988423 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yqeIp6 2988431 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yqeIp5 2988436 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


RegulonDB